RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 ELOVL4Q9GZR5 314 aa25.86■■□□□ 1.73
HMGA2-208ENST00000537429 ZNF576Q9H609 170 aa25.86■■□□□ 1.73
HMGA2-208ENST00000537429 CDH23Q9H251 3354 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 LRRC53A6NM62 1247 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 H7C4K7 107 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 C2CD2LO14523 706 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 LILRB3O75022 631 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 KRT5P13647 590 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 PCSK1P29120 753 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 SOX5P35711 763 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 STAT1P42224 750 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 ERVFC1P60507 584 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 CAMK1Q14012 370 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 ZNF280DQ6N043 979 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 RBBP8NLQ8NC74 664 aaPredicted RBP25.85■■□□□ 1.73
HMGA2-208ENST00000537429 ANP32BQ92688 251 aaKnown RBP25.85■■□□□ 1.73
HMGA2-208ENST00000537429 MRPL17Q9NRX2 175 aaKnown RBP25.85■■□□□ 1.73
HMGA2-208ENST00000537429 MTRRQ9UBK8 725 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 BACE2Q9Y5Z0 518 aa25.85■■□□□ 1.73
HMGA2-208ENST00000537429 TPM1P09493 284 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 ACAT1P24752 427 aaKnown RBP25.84■■□□□ 1.73
HMGA2-208ENST00000537429 KRT9P35527 623 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 USP8P40818 1118 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 BMS1Q14692 1282 aaKnown RBP25.84■■□□□ 1.73
HMGA2-208ENST00000537429 PSMD5Q16401 504 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 CTXN3Q4LDR2 81 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 TMC7Q7Z402 723 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 CRYBG2Q8N1P7 616 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 SLC4A11Q8NBS3 891 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 SPC24Q8NBT2 197 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 OR10T2Q8NGX3 314 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 TMEM176AQ96HP8 235 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 OXCT2Q9BYC2 517 aaPredicted RBP25.84■■□□□ 1.73
HMGA2-208ENST00000537429 DPEP3Q9H4B8 488 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 TLR9Q9NR96 1032 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 IMPACTQ9P2X3 320 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 CDH9Q9ULB4 789 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 SSX2IPQ9Y2D8 614 aa25.84■■□□□ 1.73
HMGA2-208ENST00000537429 EPOPA6NHQ4 379 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 CLCN1P35523 988 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 ORC1Q13415 861 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 PTPN14Q15678 1187 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 MICAL1Q8TDZ2 1067 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 GDPD5Q8WTR4 605 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 AUTS2Q8WXX7 1259 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 TNIP3Q96KP6 325 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 TCF25Q9BQ70 676 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 NUCKS1Q9H1E3 243 aaKnown RBP25.83■■□□□ 1.73
HMGA2-208ENST00000537429 ENTPD7Q9NQZ7 604 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 IRAK3Q9Y616 596 aa25.83■■□□□ 1.73
HMGA2-208ENST00000537429 OR6C75A6NL08 312 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 SOX1O00570 391 aaPredicted RBP25.83■■□□□ 1.72
HMGA2-208ENST00000537429 CYP26A1O43174 497 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 MFAP3LO75121 409 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 ARID5BQ14865 1188 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 RSPO2Q6UXX9 243 aaPredicted RBP25.83■■□□□ 1.72
HMGA2-208ENST00000537429 ACOT1Q86TX2 421 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 TMEM209Q96SK2 561 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 SYT15Q9BQS2 421 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 AIPL1Q9NZN9 384 aa25.83■■□□□ 1.72
HMGA2-208ENST00000537429 TMEM265A0A087WTH1 108 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 AKR1B15C9JRZ8 316 aaPredicted RBP25.82■■□□□ 1.72
HMGA2-208ENST00000537429 FSCN2O14926 492 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 ATP2C2O75185 946 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 GFPT2O94808 682 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 CXCL14O95715 111 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 PAEPP09466 180 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 ADKP55263 362 aaKnown RBP25.82■■□□□ 1.72
HMGA2-208ENST00000537429 INTS6LQ5JSJ4 861 aaKnown RBP25.82■■□□□ 1.72
HMGA2-208ENST00000537429 SLC8B1Q6J4K2 584 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 FMNL3Q8IVF7 1028 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 B3GALNT2Q8NCR0 500 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 SYN2Q92777 582 aaPredicted RBP25.82■■□□□ 1.72
HMGA2-208ENST00000537429 PKMYT1Q99640 499 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 LMAN2LQ9H0V9 348 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 RXFP1Q9HBX9 757 aa25.82■■□□□ 1.72
HMGA2-208ENST00000537429 NGRNQ9NPE2 291 aaKnown RBP25.82■■□□□ 1.72
HMGA2-208ENST00000537429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.82■■□□□ 1.72
HMGA2-208ENST00000537429 RFXAPO00287 272 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 PTPN1P18031 435 aaKnown RBP25.81■■□□□ 1.72
HMGA2-208ENST00000537429 PSMC1P62191 440 aaKnown RBP25.81■■□□□ 1.72
HMGA2-208ENST00000537429 GOLGA8FQ08AF8 430 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 GOLGA8DPQ0D2H9 430 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 E4F1Q66K89 784 aaPredicted RBP25.81■■□□□ 1.72
HMGA2-208ENST00000537429 FAM171BQ6P995 826 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 IRF2BP2Q7Z5L9 587 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 CNGA4Q8IV77 575 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 MRPL43Q8N983 215 aaKnown RBP25.81■■□□□ 1.72
HMGA2-208ENST00000537429 TC2NQ8N9U0 490 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 LRCH3Q96II8 777 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 CLSTN3Q9BQT9 956 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 DNAI2Q9GZS0 605 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 ZCWPW1Q9H0M4 648 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 ACP6Q9NPH0 428 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 CRTAC1Q9NQ79 661 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 FNIP2Q9P278 1114 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 TRANK1O15050 2925 aa25.81■■□□□ 1.72
HMGA2-208ENST00000537429 IRS1P35568 1242 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 TSPY1Q01534 308 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 PTK2Q05397 1052 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms