RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SIN3AQ96ST3 1273 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 SLC13A1Q9BZW2 595 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 NRDE2Q9H7Z3 1164 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 RUVBL1Q9Y265 456 aaKnown RBP6.95□□□□□ -1.3
CLIP1-207ENST00000536634 IPPQ9Y573 584 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 PCDHA13Q9Y5I0 950 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ZNF831Q5JPB2 1677 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ADAMTS7Q9UKP4 1686 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 HTRA2O43464 458 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 VEGFAP15692 232 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 MGAT1P26572 445 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 TARDBPQ13148 414 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 FAM102AQ5T9C2 384 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 OTUD7BQ6GQQ9 843 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 PHACTR3Q96KR7 559 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 FAM193BQ96PV7 902 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 MANSC1Q9H8J5 431 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 FBXO34Q9NWN3 711 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 TMOD3Q9NYL9 352 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 SRRDQ9UH36 339 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 SRP68Q9UHB9 627 aaKnown RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 SAP30BPQ9UHR5 308 aaKnown RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 DLEC1Q9Y238 1755 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 MYBBP1AQ9BQG0 1328 aaKnown RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 AFDNP55196 1824 aaKnown RBP6.94□□□□□ -1.3
CLIP1-207ENST00000536634 KIF20BQ96Q89 1820 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 FLT4P35916 1363 aa6.94□□□□□ -1.3
CLIP1-207ENST00000536634 MKI67P46013 3256 aaKnown RBP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 VIRMAQ69YN4 1812 aaKnown RBP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 GLTPD2A6NH11 291 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 CCDC154A6NI56 674 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 FYB1O15117 783 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 NCR1O76036 304 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 ZRANB2O95218 330 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 DDCP20711 480 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 MCM7P33993 719 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 RFC4P35249 363 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 SLC16A1P53985 500 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 IL10RAQ13651 578 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 PDCD4Q53EL6 469 aaKnown RBP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 ZNF529Q6P280 563 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 USP51Q70EK9 711 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 RHOUQ7L0Q8 258 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 MIGA2Q7L4E1 593 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 MRGPREQ86SM8 312 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 LARP4BQ92615 738 aaKnown RBP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 COA7Q96BR5 231 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 CYFIP2Q96F07 1278 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 DCLRE1CQ96SD1 692 aaKnown RBP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 SLC46A2Q9BY10 475 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 PCED1AQ9H1Q7 454 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 USP15Q9Y4E8 981 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-207ENST00000536634 CNTNAP1P78357 1384 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 TJP1Q07157 1748 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 ANKRD26Q9UPS8 1709 aa6.93□□□□□ -1.3
CLIP1-207ENST00000536634 hCG_2014768A0A024R1R8 64 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 CYR61O00622 381 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 PHKG2P15735 406 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 MAKP20794 623 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 SLC6A2P23975 617 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 SEM1Q6ZVN7 128 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 MED25Q71SY5 747 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 UBE3BQ7Z3V4 1068 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 DRC7Q8IY82 874 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 DCBLD1Q8N8Z6 715 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 STAG1Q8WVM7 1258 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 NEU4Q8WWR8 484 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-207ENST00000536634 KAT5Q92993 513 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 LENG9Q96B70 501 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 NRXN2Q9P2S2 1712 aa6.92□□□□□ -1.3
CLIP1-207ENST00000536634 POLRMTO00411 1230 aaKnown RBP6.91□□□□□ -1.3
CLIP1-207ENST00000536634 PRSS23O95084 383 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 CCND1P24385 295 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 LBX1P52954 281 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 UBXN2BQ14CS0 331 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 UAP1L1Q3KQV9 507 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 AGAP9Q5VTM2 703 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 ZNF627Q7L945 461 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 HAS1Q92839 578 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 HDAC10Q969S8 669 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 ABHD8Q96I13 439 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 TMX3Q96JJ7 454 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 PUS7Q96PZ0 661 aaKnown RBP6.91□□□□□ -1.3
CLIP1-207ENST00000536634 TESK2Q96S53 571 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 AKIP1Q9NQ31 210 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 TDP1Q9NUW8 608 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 FZD1Q9UP38 647 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 SPEF1Q9Y4P9 236 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 USP42Q9H9J4 1324 aaKnown RBP6.91□□□□□ -1.3
CLIP1-207ENST00000536634 TONSLQ96HA7 1378 aa6.91□□□□□ -1.3
CLIP1-207ENST00000536634 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
CLIP1-207ENST00000536634 BRCA2P51587 3418 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 TCRBV7S2A1N4TA0A589 114 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 DIRC3C9JPN6 131 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 TEX33O43247 280 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 LPXNO60711 386 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 POMCP01189 267 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 ITGB1P05556 798 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 ADH4P08319 380 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms