RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 MTUS1Q9ULD2 1270 aa24.05■■□□□ 1.44
HMGA2-206ENST00000536545 SCN1AP35498 2009 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 TMEM88BA6NKF7 163 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 RARAP10276 462 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 VDRP11473 427 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 FLT3LGP49771 235 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 NDST1P52848 882 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 TTC27Q6P3X3 843 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 DDX42Q86XP3 938 aaKnown RBP eCLIP24.04■■□□□ 1.44
HMGA2-206ENST00000536545 JAMLQ86YT9 394 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 KATNAL2Q8IYT4 538 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 LRRC52Q8N7C0 313 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 FAM71BQ8TC56 605 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 MAGOHBQ96A72 148 aaKnown RBP24.04■■□□□ 1.44
HMGA2-206ENST00000536545 C18orf25Q96B23 403 aaPredicted RBP24.04■■□□□ 1.44
HMGA2-206ENST00000536545 RAB17Q9H0T7 212 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 UTP11Q9Y3A2 253 aaKnown RBP24.04■■□□□ 1.44
HMGA2-206ENST00000536545 CASP8AP2Q9UKL3 1982 aa24.04■■□□□ 1.44
HMGA2-206ENST00000536545 AGPSO00116 658 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 DAPK3O43293 454 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 ALDH1A1P00352 501 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 XKR4Q5GH76 650 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 GNASQ5JWF2 1037 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 GLRA4Q5JXX5 417 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 NEUROG2Q9H2A3 272 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 GOLGA6BA6NDN3 693 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 POLR3GO15318 223 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-206ENST00000536545 HMGCRP04035 888 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 FNTAP49354 379 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 OGDHQ02218 1023 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 PRKCZQ05513 592 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 HLTFQ14527 1009 aaKnown RBP eCLIP24.03■■□□□ 1.445e-7■□□□□ 8
HMGA2-206ENST00000536545 DUPD1Q68J44 220 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 NIPA2Q8N8Q9 360 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 SMC1BQ8NDV3 1235 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 RUNDC3BQ96NL0 473 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 APOL6Q9BWW8 343 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 FAM114A2Q9NRY5 505 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 TJP2Q9UDY2 1190 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 GTF2IRD1Q9UHL9 959 aa24.03■■□□□ 1.44
HMGA2-206ENST00000536545 UBQLN1Q9UMX0 589 aaKnown RBP24.03■■□□□ 1.44
HMGA2-206ENST00000536545 SYF2O95926 243 aaKnown RBP24.02■■□□□ 1.44
HMGA2-206ENST00000536545 AKAP5P24588 427 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 CNGA2Q16280 664 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 SGO2Q562F6 1265 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 HSP90B2PQ58FF3 399 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 CYP4F22Q6NT55 531 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 FAM228AQ86W67 206 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 ZBTB9Q96C00 473 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 CPXM1Q96SM3 734 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 ERP44Q9BS26 406 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 HERPUD2Q9BSE4 406 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 USTQ9Y2C2 406 aa24.02■■□□□ 1.44
HMGA2-206ENST00000536545 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 M0QYV0 167 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 SEPT4O43236 478 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 PGK1P00558 417 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 KCNE1P15382 129 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 CYP3A5P20815 502 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 COILP38432 576 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 HSPA9P38646 679 aaKnown RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 MRPS6P82932 125 aaKnown RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 TRIM32Q13049 653 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 KCTD19Q17RG1 926 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 C9orf57Q5W0N0 161 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 DCUN1D2Q6PH85 259 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 CXCL17Q6UXB2 119 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 NT5C1AQ9BXI3 368 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 RASAL2Q9UJF2 1139 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 ERBB2P04626 1255 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 GGCXP38435 758 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 CAP1Q01518 475 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 PDCLQ13371 301 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 NBPF20Q3BBV1 942 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 CCDC137Q6PK04 289 aaKnown RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 XYLT1Q86Y38 959 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 EXD1Q8NHP7 514 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 HEXIM2Q96MH2 286 aaKnown RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 TSPAN18Q96SJ8 248 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 MRPL45Q9BRJ2 306 aaKnown RBP24.01■■□□□ 1.43
HMGA2-206ENST00000536545 DPH5Q9H2P9 285 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 LRRC19Q9H756 370 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 KIAA1257Q9ULG3 409 aa24.01■■□□□ 1.43
HMGA2-206ENST00000536545 PCNTO95613 3336 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 KIF3CO14782 793 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 ADAMTS4O75173 837 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 GPD2P43304 727 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 GABRB2P47870 512 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 PIGHQ14442 188 aaPredicted RBP24■■□□□ 1.43
HMGA2-206ENST00000536545 LRRC38Q5VT99 294 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 ALS2CLQ60I27 953 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 PAXIP1Q6ZW49 1069 aaPredicted RBP24■■□□□ 1.43
HMGA2-206ENST00000536545 SMG8Q8ND04 991 aaKnown RBP24■■□□□ 1.43
HMGA2-206ENST00000536545 MAIP1Q8WWC4 291 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 RNF39Q9H2S5 420 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 WDR35Q9P2L0 1181 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 IPPQ9Y573 584 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 SNX9Q9Y5X1 595 aa24■■□□□ 1.43
HMGA2-206ENST00000536545 SMIM28A0A1B0GU29 152 aa23.99■■□□□ 1.43
HMGA2-206ENST00000536545 SIGLEC16A6NMB1 481 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms