RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SDCCAG8Q86SQ7 713 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-203ENST00000535977 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-203ENST00000535977 TRIM7Q9C029 511 aa18.95■□□□□ 0.62
RAB40C-203ENST00000535977 SEMA4AQ9H3S1 761 aa18.95■□□□□ 0.62
RAB40C-203ENST00000535977 OCEL1Q9H607 264 aa18.95■□□□□ 0.62
RAB40C-203ENST00000535977 SCINQ9Y6U3 715 aa18.95■□□□□ 0.62
RAB40C-203ENST00000535977 MROH7Q68CQ1 1323 aa18.95■□□□□ 0.62
RAB40C-203ENST00000535977 PROSCO94903 275 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 CUL2Q13617 745 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 TDRD10Q5VZ19 366 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 MON1BQ7L1V2 547 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 ABRAQ8N0Z2 381 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 BBOF1Q8ND07 529 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 MGARPQ8TDB4 240 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 ASAP3Q8TDY4 903 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 DYDC1Q8WWB3 177 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 DTNBP1Q96EV8 351 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 CGRRF1Q99675 332 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 NRBP2Q9NSY0 501 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 RBAKQ9NYW8 714 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 FZD9O00144 591 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 SLCO1A2P46721 670 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 SP4Q02446 784 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 TSNAXIP1Q2TAA8 658 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 UBAP2Q5T6F2 1119 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 TRAPPC9Q96Q05 1148 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 PTPN22Q9Y2R2 807 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 IGKV6D-21A0A0A0MT36 114 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 A0A0B4J269 797 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 O00370 1275 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 CREB3O43889 395 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 ACO1P21399 889 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 RRM1P23921 792 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 CETN2P41208 172 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 PTDSS1P48651 473 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 PTK6Q13882 451 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 TAOK1Q7L7X3 1001 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 PHF13Q86YI8 300 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 RHOT1Q8IXI2 618 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 UHMK1Q8TAS1 419 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 CPA5Q8WXQ8 436 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 NUDCD1Q96RS6 583 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 DDX23Q9BUQ8 820 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 FBXO40Q9UH90 709 aa18.94■□□□□ 0.62
RAB40C-203ENST00000535977 ZNFX1Q9P2E3 1918 aaKnown RBP18.94■□□□□ 0.62
RAB40C-203ENST00000535977 UNC5CO95185 931 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 GLRA2P23416 452 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 NLRP11P59045 1033 aaKnown RBP18.93■□□□□ 0.62
RAB40C-203ENST00000535977 KRT17Q04695 432 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 C1QBPQ07021 282 aaKnown RBP18.93■□□□□ 0.62
RAB40C-203ENST00000535977 CEP128Q6ZU80 1094 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.93■□□□□ 0.62
RAB40C-203ENST00000535977 ANKLE1Q8NAG6 615 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 EPS8L3Q8TE67 593 aaKnown RBP18.93■□□□□ 0.62
RAB40C-203ENST00000535977 FAM136AQ96C01 138 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 KLRG1Q96E93 195 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 SNF8Q96H20 258 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 GJA3Q9Y6H8 435 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 H0Y3Z8 333 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 PDLIM1O00151 329 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 RASGRF2O14827 1237 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 ATP5DP30049 168 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 KCNJ1P48048 391 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 GRM1Q13255 1194 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 SH3D19Q5HYK7 790 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 DDX27Q96GQ7 796 aaKnown RBP18.93■□□□□ 0.62
RAB40C-203ENST00000535977 MSTO1Q9BUK6 570 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 FHDC1Q9C0D6 1143 aaPredicted RBP18.93■□□□□ 0.62
RAB40C-203ENST00000535977 PCDHB4Q9Y5E5 795 aa18.93■□□□□ 0.62
RAB40C-203ENST00000535977 LRRIQ4A6NIV6 560 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 VNN1O95497 513 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 SETSIPP0DME0 302 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 SKIV2L2P42285 1042 aaKnown RBP18.92■□□□□ 0.62
RAB40C-203ENST00000535977 ACOT2P49753 483 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 MGAT5Q09328 741 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 TNFAIP8L3Q5GJ75 292 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 NLGN2Q8NFZ4 835 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 TMEM143Q96AN5 459 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 DCLK3Q9C098 648 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 DNAAF2Q9NVR5 837 aaKnown RBP18.92■□□□□ 0.62
RAB40C-203ENST00000535977 PRKAG3Q9UGI9 489 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 PCDHGA4Q9Y5G9 962 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 SPDYE16A6NNV3 312 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-203ENST00000535977 GNA15P30679 374 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 ZNF568Q3ZCX4 644 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 IRGCQ6NXR0 463 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 CPNE8Q86YQ8 564 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 IMPG2Q9BZV3 1241 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 ASIC3Q9UHC3 531 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 AFG3L2Q9Y4W6 797 aa18.92■□□□□ 0.62
RAB40C-203ENST00000535977 TPP2P29144 1249 aaPredicted RBP18.91■□□□□ 0.62
RAB40C-203ENST00000535977 NOMO3P69849 1222 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 SP2Q02086 613 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 LMNB2Q03252 620 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 CCNG2Q16589 344 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 MUM1Q2TAK8 710 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 FAM160B1Q5W0V3 765 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 PLEKHA7Q6IQ23 1121 aa18.91■□□□□ 0.62
RAB40C-203ENST00000535977 ZPBP2Q6X784 338 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms