RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-214ENST00000535222 PARP2Q9UGN5 583 aa8.27□□□□□ -1.09
CPSF7-214ENST00000535222 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
CPSF7-214ENST00000535222 RP1L1Q8IWN7 2480 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 A0A1B0GTW7 788 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 BLACEA4D250 179 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 TMEM150BA6NC51 233 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 SGK1O00141 431 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 TRIM66O15016 1216 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 ANP32CO43423 234 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 ADAM23O75077 832 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 CIITAP33076 1130 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 MATKP42679 507 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 GRK6P43250 576 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 KIR2DL1P43626 348 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 GNAQP50148 359 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 CLCNKBP51801 687 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 JAK3P52333 1124 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 TLE1Q04724 770 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 ZNF268Q14587 947 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 HLA-BQ31612 363 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 LINC00303Q3SY05 128 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 WDR45BQ5MNZ6 344 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 SYCP2LQ5T4T6 812 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 FERMT3Q86UX7 667 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 CPA6Q8N4T0 437 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 CCDC33Q8N5R6 958 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 DEFB119Q8N690 84 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 TXNDC5Q8NBS9 432 aaKnown RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 C3orf58Q8NDZ4 430 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 FOXJ1Q92949 421 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 USP13Q92995 863 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 PGBD1Q96JS3 809 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 HSPA12BQ96MM6 686 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 UROC1Q96N76 676 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 PPP1R10Q96QC0 940 aaKnown RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 RIT2Q99578 217 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 SH2D3AQ9BRG2 576 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 IL21Q9HBE4 155 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 GPRC5CQ9NQ84 441 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 GMIPQ9P107 970 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-214ENST00000535222 DDX19BQ9UMR2 479 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 CCL26Q9Y258 94 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 MYLKQ15746 1914 aa8.26□□□□□ -1.09
CPSF7-214ENST00000535222 ZNF217O75362 1048 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 GABRR2P28476 465 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 OPRD1P41143 372 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 BRCC3P46736 316 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 EPHB3P54753 998 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 MFAP1P55081 439 aaKnown RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 ARPP19P56211 112 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 FOXK1P85037 733 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 MBTD1Q05BQ5 628 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 NMIQ13287 307 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 IMMTQ16891 758 aaKnown RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 GAB4Q2WGN9 574 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 EOGTQ5NDL2 527 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 PPP1R18Q6NYC8 613 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 USP49Q70CQ1 688 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 CATIPQ7Z7H3 387 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 DHX40Q8IX18 779 aaKnown RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 ALLCQ8N6M5 410 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 RNF149Q8NC42 400 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 ENGASEQ8NFI3 743 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 C1orf216Q8TAB5 229 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 IGDCC4Q8TDY8 1250 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 OTUD7AQ8TE49 926 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 OSCP1Q8WVF1 389 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 HMGB4Q8WW32 186 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 RFFLQ8WZ73 363 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 CRISPLD1Q9H336 500 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 ZNF768Q9H5H4 540 aaKnown RBP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 LRRC4CQ9HCJ2 640 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 CD248Q9HCU0 757 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 TDP1Q9NUW8 608 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 HSFX1Q9UBD0 423 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 TCEAL9Q9UHQ7 104 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPSF7-214ENST00000535222 MED13Q9UHV7 2174 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 APCP25054 2843 aa8.25□□□□□ -1.09
CPSF7-214ENST00000535222 ARID2Q68CP9 1835 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 ANO9A1A5B4 782 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 DDX11L8A8MPP1 907 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 I3L4J1 428 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 IFIT3O14879 490 aaKnown RBP8.24□□□□□ -1.09
CPSF7-214ENST00000535222 DDAH1O94760 285 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 PLEKHA8P1O95397 391 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 NPTXRO95502 500 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 GABRG2P18507 467 aa8.24□□□□□ -1.09
CPSF7-214ENST00000535222 DDX6P26196 483 aaKnown RBP eCLIP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms