RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MGAT5BQ3V5L5 792 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 LMBRD2Q68DH5 695 aaPredicted RBP9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 TPRG1Q6ZUI0 275 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 FRMD5Q7Z6J6 570 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 TMC8Q8IU68 726 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 GPD1LQ8N335 351 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 C1orf127Q8N9H9 656 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 SHKBP1Q8TBC3 707 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 ZSCAN18Q8TBC5 510 aaPredicted RBP9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 KCNG4Q8TDN1 519 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 CACTINQ8WUQ7 758 aaKnown RBP9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 SMARCD2Q92925 531 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 ZSWIM3Q96MP5 696 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 ASB16Q96NS5 453 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 LPIN3Q9BQK8 851 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 ZCWPW1Q9H0M4 648 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 BRD9Q9H8M2 597 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 PCDHA7Q9UN72 937 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 AGAP1Q9UPQ3 857 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 TICRRQ7Z2Z1 1910 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 KIAA0391O15091 583 aaKnown RBP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 EIF3DO15371 548 aaKnown RBP eCLIP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 CD72P21854 359 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 CASP1P29466 404 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 GDI1P31150 447 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 NBL1P41271 181 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 VIPR2P41587 438 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 VEPH1Q14D04 833 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 FAM26FQ5R3K3 315 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 SCARA3Q6AZY7 606 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 VITQ6UXI7 678 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 DNAJB7Q7Z6W7 309 aaPredicted RBP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ITIH5Q86UX2 942 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 CSGALNACT2Q8N6G5 542 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 GIPC2Q8TF65 315 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 PSMG2Q969U7 264 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 BORCS6Q96GS4 357 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ANKRD36BP1Q96IX9 119 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 C7orf25Q9BPX7 421 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 TRMT61BQ9BVS5 477 aaKnown RBP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 LRRC3Q9BY71 257 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 MTMR12Q9C0I1 747 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 RBSNQ9H1K0 784 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 BLZF1Q9H2G9 400 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ATXN3LQ9H3M9 355 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 MAGEF1Q9HAY2 307 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 PDE11AQ9HCR9 933 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF334Q9HCZ1 680 aaPredicted RBP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 LTB4R2Q9NPC1 389 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 HEBP1Q9NRV9 189 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ABI2Q9NYB9 513 aaPredicted RBP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ASB3Q9Y575 518 aa9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 NUP210Q8TEM1 1887 aaPredicted RBP9.19□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF233A6NK53 670 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 FAM170BA6NMN3 283 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 HEPACAM2A8MVW5 462 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 PROB1E7EW31 1015 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 NCANO14594 1321 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 HUS1O60921 280 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 UBE4BO95155 1302 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 TNNC2P02585 160 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 COL4A2P08572 1712 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 HAPLN1P10915 354 aaPredicted RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 GLULP15104 373 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 PSMC3P17980 439 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 ATF6P18850 670 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 ACAT1P24752 427 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 GABRR2P28476 465 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 HOXD13P35453 343 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 AFMP43652 599 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 TUFMP49411 452 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 RBP5P82980 135 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 CBX1P83916 185 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 TSPY1Q01534 308 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DNM1Q05193 864 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 SMARCB1Q12824 385 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 TAF12Q16514 161 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 ARHGAP15Q53QZ3 475 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 STXBP5Q5T5C0 1151 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 GPR158Q5T848 1215 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 UNC13DQ70J99 1090 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 ASCL5Q7RTU5 278 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 LRRTM3Q86VH5 581 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 CBWD2Q8IUF1 395 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 GPIHBP1Q8IV16 184 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 NELFCDQ8IXH7 590 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 CEP57L1Q8IYX8 460 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DCP1BQ8IZD4 617 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 LRRC52Q8N7C0 313 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 PATJQ8NI35 1801 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 SPPL2BQ8TCT7 592 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 C2orf15Q8WU43 125 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DEPDC1BQ8WUY9 529 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DNASE1L2Q92874 299 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 NKD2Q969F2 451 aaPredicted RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DDX23Q9BUQ8 820 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 BCO2Q9BYV7 579 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms