RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 IER5LQ5T953 404 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 DNAJB7Q7Z6W7 309 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 C1orf127Q8N9H9 656 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 TMC2Q8TDI7 906 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 DHX58Q96C10 678 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 DUSP9Q99956 384 aaKnown RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 LTB4R2Q9NPC1 389 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 AGAP1Q9UPQ3 857 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 HPSEQ9Y251 543 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 ATP8B3O60423 1300 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 PDXKO00764 312 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 ZNF263O14978 683 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 NARSO43776 548 aaKnown RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 RPN1P04843 607 aaKnown RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 NRLP54845 237 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 BECN1Q14457 450 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 FAM78AQ5JUQ0 283 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 FAM171BQ6P995 826 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 FLCNQ8NFG4 579 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 PKMYT1Q99640 499 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 AGPAT3Q9NRZ7 376 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 HCFC1R1Q9NWW0 138 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 PTPRDP23468 1912 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 POLR2DO15514 142 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 IGFBP6P24592 240 aaPredicted RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 POLR2BP30876 1174 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 GPC5P78333 572 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 TFAMQ00059 246 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 DUSP4Q13115 394 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 KCNB1Q14721 858 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 SLC5A9Q2M3M2 681 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 RALGPS2Q86X27 583 aaPredicted RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 CELF5Q8N6W0 485 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 NELL1Q92832 810 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 MCRS1Q96EZ8 462 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 FNBP1Q96RU3 617 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 DMAC2Q9NW81 257 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 PDGFBP01127 241 aaPredicted RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 ITGB3P05106 788 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 MYL4P12829 197 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 HOXA6P31267 233 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 CASP5P51878 434 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 CYP24A1Q07973 514 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 BFSP1Q12934 665 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 ANGPT1Q15389 498 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 COBLL1Q53SF7 1204 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 PDCL2Q8N4E4 241 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 CSGALNACT2Q8N6G5 542 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 CSGALNACT1Q8TDX6 532 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 OVCA2Q8WZ82 227 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 BRD9Q9H8M2 597 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 ZNF334Q9HCZ1 680 aaPredicted RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 PCDHGA2Q9Y5H1 932 aa11.16□□□□□ -0.62
CSDE1-217ENST00000534699 HELZP42694 1942 aaKnown RBP11.16□□□□□ -0.62
CSDE1-217ENST00000534699 NCANO14594 1321 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 GREB1Q4ZG55 1949 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 IKBKBO14920 756 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 TRIM66O15016 1216 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 TGFB1I1O43294 461 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 P4HA1P13674 534 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 PPP1R2P41236 205 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 TAF12Q16514 161 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 SLC39A12Q504Y0 691 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 WSCD1Q658N2 575 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 C1orf210Q8IVY1 113 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 OR10T2Q8NGX3 314 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 CBWD1Q9BRT8 395 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 EXOC1Q9NV70 894 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 CA14Q9ULX7 337 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 DPYSL4O14531 572 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 ACTN4O43707 911 aaKnown RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 CALUO43852 315 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 SPAG1Q07617 926 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 PDGFRLQ15198 375 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 SNRNP35Q16560 246 aaKnown RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 TANGO2Q6ICL3 276 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 PDILTQ8N807 584 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 FSIP1Q8NA03 581 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 ZSCAN18Q8TBC5 510 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 SCFD1Q8WVM8 642 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 NKD2Q969F2 451 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-217ENST00000534699 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 C8orf48Q96LL4 319 aa11.15□□□□□ -0.62
CSDE1-217ENST00000534699 PPEF2O14830 753 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms