RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RAP1GAPP47736 663 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 MRPS6P82932 125 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 HIC1Q14526 733 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 ZNF268Q14587 947 aaPredicted RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 WDTC1Q8N5D0 677 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 IPO4Q8TEX9 1081 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 SLCO2A1Q92959 643 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 MAGOHBQ96A72 148 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 C18orf8Q96DM3 657 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 DDX27Q96GQ7 796 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 LRRC19Q9H756 370 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 NFU1Q9UMS0 254 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 TRPV2Q9Y5S1 764 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 CASP8AP2Q9UKL3 1982 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 FAM170AA1A519 330 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 SIGLEC16A6NMB1 481 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 O00370 1275 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 TTI1O43156 1089 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 SETSIPP0DME0 302 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 CST5P28325 142 aaPredicted RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 GABRB2P47870 512 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 CDH8P55286 799 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 COPS2P61201 443 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 HLTFQ14527 1009 aaKnown RBP eCLIP14.18□□□□□ -0.14
BEST1-208ENST00000534553 ACAP1Q15027 740 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 GLIPR1L2Q4G1C9 344 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 LCLAT1Q6UWP7 414 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 SYDE1Q6ZW31 735 aaPredicted RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 POLNQ7Z5Q5 900 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 GSPT2Q8IYD1 628 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 PRELID2Q8N945 189 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 TMEM40Q8WWA1 233 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 HEXIM2Q96MH2 286 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 RUFY1Q96T51 708 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 ERP44Q9BS26 406 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 CFHR5Q9BXR6 569 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 ELOVL4Q9GZR5 314 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 NXF3Q9H4D5 531 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 SYNCQ9H7C4 482 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 DDX56Q9NY93 547 aaKnown RBP14.18□□□□□ -0.14
BEST1-208ENST00000534553 HSF2BPO75031 334 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 FAM163BP0C2L3 166 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 HOXD10P28358 340 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 NDST1P52848 882 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 MRPS25P82663 173 aaKnown RBP14.17□□□□□ -0.14
BEST1-208ENST00000534553 MTMR3Q13615 1198 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 SPDYCQ5MJ68 293 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 C9orf57Q5W0N0 161 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 DENND1BQ6P3S1 775 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 CCDC137Q6PK04 289 aaKnown RBP14.17□□□□□ -0.14
BEST1-208ENST00000534553 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
BEST1-208ENST00000534553 GRK7Q8WTQ7 553 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 ZMAT2Q96NC0 199 aaKnown RBP14.17□□□□□ -0.14
BEST1-208ENST00000534553 MCEEQ96PE7 176 aa14.17□□□□□ -0.14
BEST1-208ENST00000534553 ESYT3A0FGR9 886 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 M0QYV0 167 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 OPA1O60313 960 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 MICAL2O94851 1124 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 KRT3P12035 628 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SP3Q02447 781 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 NBPF20Q3BBV1 942 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SV2CQ496J9 727 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 C2CD6Q53TS8 623 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 FBXO47Q5MNV8 452 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 UBXN11Q5T124 520 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 JAMLQ86YT9 394 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 RCOR2Q8IZ40 523 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
BEST1-208ENST00000534553 TWNKQ96RR1 684 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 TRIM7Q9C029 511 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 ERVK-5Q9HDB9 667 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 XPNPEP3Q9NQH7 507 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SLC38A7Q9NVC3 462 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 GDAP2Q9NXN4 497 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 IPPQ9Y573 584 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SNX9Q9Y5X1 595 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SCN10AQ9Y5Y9 1956 aa14.16□□□□□ -0.14
BEST1-208ENST00000534553 SMIM28A0A1B0GU29 152 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 ZSCAN5CA6NGD5 496 aaPredicted RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 PIRO00625 290 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 ADAMTS4O75173 837 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 CABYRO75952 493 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 KRT7P08729 469 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 DESP17661 470 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 PTPN7P35236 360 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 COILP38432 576 aaPredicted RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 HSPA9P38646 679 aaKnown RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 GPD2P43304 727 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 GUCY2FP51841 1108 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 PSMC1P62191 440 aaKnown RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 RPL7AP62424 266 aaKnown RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 ZNF200P98182 395 aaPredicted RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 PRKCZQ05513 592 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 PDCLQ13371 301 aa14.15□□□□□ -0.14
BEST1-208ENST00000534553 HADHQ16836 314 aaKnown RBP14.15□□□□□ -0.14
BEST1-208ENST00000534553 ODF2Q5BJF6 829 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms