RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 RRADP55042 308 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TUBB4BP68371 445 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 IL13RA1P78552 427 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CD83Q01151 205 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MYL5Q02045 173 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 PPARDQ03181 441 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 PPARAQ07869 468 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MESP2Q0VG99 397 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 KLF1Q13351 362 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 RIPK1Q13546 671 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MTMR1Q13613 665 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SPIDRQ14159 915 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BTG3Q14201 252 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 DGKDQ16760 1214 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ABCB5Q2M3G0 1257 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FAM153CQ494X1 144 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BRDTQ58F21 947 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 HSP90AA4PQ58FG1 418 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CT83Q5H943 113 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 AKNAD1Q5T1N1 836 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 GPR158Q5T848 1215 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SFMBT2Q5VUG0 894 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ALS2CLQ60I27 953 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 KCTD16Q68DU8 428 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 NAA16Q6N069 864 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BORAQ6PGQ7 559 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FAM180AQ6UWF9 173 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 RINLQ6ZS11 566 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SPATA31D4Q6ZUB0 917 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC121Q6ZUS5 278 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MICALCLQ6ZW33 695 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 RASGRP2Q7LDG7 609 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CXXC5Q7LFL8 322 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CXorf67Q86X51 503 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 IQCKQ8N0W5 287 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 POU5F2Q8N7G0 328 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BHLHE22Q8NFJ8 381 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 LINS1Q8NG48 757 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FNIP1Q8TF40 1166 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MRPS27Q92552 414 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SLC35B4Q969S0 331 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC47Q96A33 483 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 HVCN1Q96D96 273 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TBC1D31Q96DN5 1066 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BICD1Q96G01 975 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 DYDC2Q96IM9 177 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 RAX2Q96IS3 184 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FAM227BQ96M60 508 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 PANX2Q96RD6 677 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 NAPGQ99747 312 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SYT15Q9BQS2 421 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 LZTS2Q9BRK4 669 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SDF4Q9BRK5 362 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC8Q9H0W5 538 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TMX4Q9H1E5 349 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 RANBP17Q9H2T7 1088 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MS4A5Q9H3V2 200 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MTG2Q9H4K7 406 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ZMAT4Q9H898 229 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ZWILCHQ9H900 591 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 JADE2Q9NQC1 790 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TOPORSQ9NS56 1045 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 HSPBP1Q9NZL4 362 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BTBD7Q9P203 1132 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 WDR35Q9P2L0 1181 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CNOT8Q9UFF9 292 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SUN2Q9UH99 717 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FAM153AQ9UHL3 310 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 BAIAP2L1Q9UHR4 511 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 LNPEPQ9UIQ6 1025 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MAGEL2Q9UJ55 1249 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CDC42EP3Q9UKI2 254 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TFR2Q9UP52 801 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 AGAP1Q9UPQ3 857 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 INVSQ9Y283 1065 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 C2CD2Q9Y426 696 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CLIC4Q9Y696 253 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TULP4Q9NRJ4 1543 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ATP7BP35670 1465 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CHD2O14647 1828 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MAST1Q9Y2H9 1570 aa3.46□□□□□ -1.85
CSDE1-216ENST00000534389 SH3TC1Q8TE82 1336 aa3.46□□□□□ -1.85
CSDE1-216ENST00000534389 OVOS2A0A0G2JMS6 1433 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 OVOS2A0A0J9YW53 1432 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 OVOS2Q6IE36 1432 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 TRPM2O94759 1503 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 DEPDC5O75140 1603 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 A0A0G2JNJ9 132 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 TMEM221A6NGB7 291 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CCT8L1PA6NM43 557 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SRRM3A6NNA2 597 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 A8MUI8 341 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CHL1O00533 1208 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 KIF3BO15066 747 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF185O15231 689 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 FOXN1O15353 648 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ATP2C2O75185 946 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SASH1O94885 1247 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms