RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 SHC4Q6S5L8 630 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 PDCL2Q8N4E4 241 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 GIPC2Q8TF65 315 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 FAM3CQ92520 227 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 RSPRY1Q96DX4 576 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 FAM84AQ96KN4 292 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 ABI2Q9NYB9 513 aaPredicted RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 FBXO4Q9UKT5 387 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 R3HCC1Q9Y3T6 440 aaKnown RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 PCDHB5Q9Y5E4 795 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 SNX9Q9Y5X1 595 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 PIAS3Q9Y6X2 628 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 USP34Q70CQ2 3546 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 ZNF233A6NK53 670 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 CHADO15335 359 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 TMEM191BP0C7N4 346 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 HOXD13P35453 343 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ASIC1P78348 528 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 FCHO2Q0JRZ9 810 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 NFE2Q16621 373 aaPredicted RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 ZNF528Q3MIS6 628 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 TMEM86AQ8N2M4 240 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 LRRC52Q8N7C0 313 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 CXorf38Q8TB03 319 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ZNF507Q8TCN5 953 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 CSGALNACT1Q8TDX6 532 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 LRRC3BQ96PB8 259 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ACBD6Q9BR61 282 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 PI4K2AQ9BTU6 479 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 TASP1Q9H6P5 420 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 LMAN1LQ9HAT1 526 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 TMLHEQ9NVH6 421 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 INTS13Q9NVM9 706 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 DDX43Q9NXZ2 648 aaKnown RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 ITGA11Q9UKX5 1188 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 L1RE1Q9UN81 338 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 DOCK6Q96HP0 2047 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 NCANO14594 1321 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 TRIP11Q15643 1979 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 NOTCH4Q99466 2003 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ARNTLO00327 626 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 POLR2DO15514 142 aaKnown RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 F13A1P00488 732 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 CCNE1P24864 410 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 CDC25CP30307 473 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ME1P48163 572 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 LHX1P48742 406 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 KPNA1P52294 538 aaPredicted RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 MLLT6P55198 1093 aaPredicted RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 CYP4F8P98187 520 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 MYL7Q01449 175 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 BFSP1Q12934 665 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 MYO1EQ12965 1108 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 MTAPQ13126 283 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 SURF1Q15526 300 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 DUOXA2Q1HG44 320 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 FAM26FQ5R3K3 315 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 LMBRD2Q68DH5 695 aaPredicted RBP9.58□□□□□ -0.88
COPB1-211ENST00000534234 CNNM4Q6P4Q7 775 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 CBWD2Q8IUF1 395 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ZNF687Q8N1G0 1237 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 RDH13Q8NBN7 331 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ATRIPQ8WXE1 791 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 ANKRD36BP1Q96IX9 119 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 GCNAQ96QF7 691 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 C7orf25Q9BPX7 421 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 SLC46A2Q9BY10 475 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 MTMR12Q9C0I1 747 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 KIAA1586Q9HCI6 787 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 OBP2AQ9NY56 170 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 HSPBP1Q9NZL4 362 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 SIX4Q9UIU6 781 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 GTF3C4Q9UKN8 822 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 PCDHA7Q9UN72 937 aa9.58□□□□□ -0.88
COPB1-211ENST00000534234 COL4A3Q01955 1670 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 MYO15AQ9UKN7 3530 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
COPB1-211ENST00000534234 SLC38A8A6NNN8 435 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 GABRDO14764 452 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 EIF3DO15371 548 aaKnown RBP eCLIP9.57□□□□□ -0.88
COPB1-211ENST00000534234 TGFB1I1O43294 461 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 KINO60870 393 aaKnown RBP9.57□□□□□ -0.88
COPB1-211ENST00000534234 TNNC2P02585 160 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 CSH1P0DML2 217 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 CSH2P0DML3 217 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 HMGA1P17096 107 aaKnown RBP9.57□□□□□ -0.88
COPB1-211ENST00000534234 ACAT1P24752 427 aaKnown RBP9.57□□□□□ -0.88
COPB1-211ENST00000534234 CYP2F1P24903 491 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 WEE1P30291 646 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 DDR2Q16832 855 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 SOWAHAQ2M3V2 549 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 ARHGAP29Q52LW3 1261 aa9.57□□□□□ -0.88
COPB1-211ENST00000534234 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms