RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 FOXJ2Q9P0K8 574 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 STAP2Q9UGK3 403 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 ZNHIT2Q9UHR6 403 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 CPA4Q9UI42 421 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 RAD54BQ9Y620 910 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 ZAR1LA6NP61 321 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 MPPED1O15442 326 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 TSPAN6O43657 245 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 TRIAP1O43715 76 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 TUSC2O75896 110 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 NUDT3O95989 172 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 GCLCP48506 637 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 KCNJ5P48544 419 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 CLK3P49761 638 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 HNRNPMP52272 730 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 AGFG1P52594 562 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 BOP1Q14137 746 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 SIMC1Q8NDZ2 872 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 FAM46DQ8NEK8 389 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 TOR1AIP2Q8NFQ8 470 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 FBXL20Q96IG2 436 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 PDLIM2Q96JY6 352 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 NT5C1BQ96P26 610 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 OSBPL9Q96SU4 736 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 HEPHQ9BQS7 1158 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 MED16Q9Y2X0 877 aa5.01□□□□□ -1.61
ATPAF1-211ENST00000534216 POLR2AP24928 1970 aaKnown RBP5□□□□□ -1.61
ATPAF1-211ENST00000534216 UNC5CO95185 931 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 ITGALP20701 1170 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 RARRES1P49788 294 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 NXPH1P58417 271 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 ITIH3Q06033 890 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 PTPRRQ15256 657 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 ANO6Q4KMQ2 910 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 RBM20Q5T481 1227 aaKnown RBP5□□□□□ -1.61
ATPAF1-211ENST00000534216 NPNTQ6UXI9 565 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 B3GALNT2Q8NCR0 500 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 PGBD1Q96JS3 809 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 B3GNT5Q9BYG0 378 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 AMBRA1Q9C0C7 1298 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 TMEM60Q9H2L4 133 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 RIOX1Q9H6W3 641 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 PIH1D1Q9NWS0 290 aaKnown RBP5□□□□□ -1.61
ATPAF1-211ENST00000534216 HESX1Q9UBX0 185 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 PLEKHM1Q9Y4G2 1056 aa5□□□□□ -1.61
ATPAF1-211ENST00000534216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5□□□□□ -1.61
ATPAF1-211ENST00000534216 MGST3O14880 152 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 DCLK1O15075 740 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 ERC2O15083 957 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 GRPP07492 148 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 NPR1P16066 1061 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 NANOS3P60323 173 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 GPSM2P81274 684 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 MLC1Q15049 377 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 KAZNQ674X7 775 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 DNAJC10Q8IXB1 793 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 FAM109AQ8N4B1 249 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 CAGE1Q8TC20 777 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 TFAP2BQ92481 460 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 SLC46A1Q96NT5 459 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 P2RX7Q99572 595 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 SPATA5L1Q9BVQ7 753 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 TTYH3Q9C0H2 523 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 PRDM13Q9H4Q3 707 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 ZMAT3Q9HA38 289 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 C1orf112Q9NSG2 853 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 TLK1Q9UKI8 766 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 INSL6Q9Y581 213 aa4.99□□□□□ -1.61
ATPAF1-211ENST00000534216 A0A1W2PPL8 197 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 WDR27A2RRH5 827 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ADM5C9JUS6 153 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 CHRM2P08172 466 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 CD6P30203 668 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ZNF134P52741 427 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ARFIP2P53365 341 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 MAPK10P53779 464 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 TXNRD1Q16881 649 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 LONRF3Q496Y0 759 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 AMOTQ4VCS5 1084 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ARHGAP29Q52LW3 1261 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 VPS53Q5VIR6 699 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 STRIP1Q5VSL9 837 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 TMEM108Q6UXF1 575 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 COL23A1Q86Y22 540 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 KIAA0319LQ8IZA0 1049 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 KBTBD7Q8WVZ9 684 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 TSR2Q969E8 191 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 DUSP26Q9BV47 211 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ACTRT3Q9BYD9 372 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 TRIM54Q9BYV2 358 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 TPSD1Q9BZJ3 242 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ATP6V0A4Q9HBG4 840 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 KLC4Q9NSK0 619 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms