RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 OR6C75A6NL08 312 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 STK25O00506 426 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 GALR2O43603 387 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 TADA3O75528 432 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 VNN1O95497 513 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 PDGFRBP09619 1106 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 HMGA1P17096 107 aaKnown RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 AOC1P19801 751 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 RAP1GAPP47736 663 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 MRE11P49959 708 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 CDH8P55286 799 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 CYP24A1Q07973 514 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 PLD1Q13393 1074 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ORC1Q13415 861 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 BMT2Q1RMZ1 405 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 SLC44A4Q53GD3 710 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 RIF1Q5UIP0 2472 aaKnown RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 NAIF1Q69YI7 327 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 TRAPPC11Q7Z392 1133 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 LIMS2Q7Z4I7 341 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 MAML2Q8IZL2 1156 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ZSCAN18Q8TBC5 510 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ZNF512Q96ME7 567 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 SLC22A12Q96S37 553 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 MFSD1Q9H3U5 465 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 AVENQ9NQS1 362 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ARHGEF3Q9NR81 526 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 SLC2A4RGQ9NR83 387 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 C2orf42Q9NWW7 574 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
SSBP3-215ENST00000533946 FAM13BQ9NYF5 915 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 WNT16Q9UBV4 365 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 EXOC7Q9UPT5 735 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 CCL26Q9Y258 94 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 GPR179Q6PRD1 2367 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 MIA3Q5JRA6 1907 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ANAPC1Q9H1A4 1944 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 SPTBN4Q9H254 2564 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 FAM237AA0A1B0GTK4 181 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 ZNF233A6NK53 670 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 EIF3DO15371 548 aaKnown RBP eCLIP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 XPOTO43592 962 aaKnown RBP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 HAPLN1P10915 354 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 SCP2P22307 547 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 TARSP26639 723 aaKnown RBP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 GABRR2P28476 465 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 MYL6P60660 151 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 USP46P62068 366 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 DPYDQ12882 1025 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 MYBPC2Q14324 1141 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 MGAT5BQ3V5L5 792 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 SPOPLQ6IQ16 392 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 ELMSAN1Q6PJG2 1045 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 PDZD4Q76G19 769 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 FRMD5Q7Z6J6 570 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 CCDC105Q8IYK2 499 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 CHFRQ96EP1 664 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 SLC46A2Q9BY10 475 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 XYLT2Q9H1B5 865 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 CUEDC2Q9H467 287 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 TMEM206Q9H813 350 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 POLR3BQ9NW08 1133 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-215ENST00000533946 DMAC2Q9NW81 257 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 CFAP45Q9UL16 551 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 LAMA1P25391 3075 aa10.36□□□□□ -0.75
SSBP3-215ENST00000533946 PVALEFA0A1B0GWK0 134 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 HEPACAM2A8MVW5 462 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ARNTLO00327 626 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 CLDN5O00501 218 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 GABRDO14764 452 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 RPN1P04843 607 aaKnown RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 TMEM191BP0C7N4 346 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 GDI1P31150 447 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 PGFP49763 221 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 CLCN5P51795 746 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 KRT85P78386 507 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 RBP5P82980 135 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 TNK2Q07912 1038 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 PNOCQ13519 176 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ALCAMQ13740 583 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 PSMD6Q15008 389 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 KNOP1Q1ED39 458 aaKnown RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 SV2CQ496J9 727 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 TDRD10Q5VZ19 366 aaKnown RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 TXNDC11Q6PKC3 985 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 TSSK4Q6SA08 328 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 KRBA2Q6ZNG9 492 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ASCL5Q7RTU5 278 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ARID3BQ8IVW6 561 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 DTWD2Q8NBA8 298 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ATOH1Q92858 354 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 SMARCD2Q92925 531 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 PSMG2Q969U7 264 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 CYP2S1Q96SQ9 504 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms