RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 GJB7Q6PEY0 223 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 RAD9BQ6WBX8 426 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 TOGARAM2Q6ZUX3 1019 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 IRF2BP2Q7Z5L9 587 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 ARHGEF19Q8IW93 802 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 ZNF689Q96CS4 500 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 INPP5FQ9Y2H2 1132 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 ATP8B3O60423 1300 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 SMIM28A0A1B0GU29 152 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 KIF5CO60282 957 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 LCA5LO95447 670 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 POLR2BP30876 1174 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 MYL6P60660 151 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 GRIK3Q13003 919 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 BTG3Q14201 252 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 WDR72Q3MJ13 1102 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 CMTR2Q8IYT2 770 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 LRRC43Q8N309 656 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 GSTCDQ8NEC7 633 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 HPDLQ96IR7 371 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 PPP1R13BQ96KQ4 1090 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 PI4K2AQ9BTU6 479 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 RNF19AQ9NV58 838 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 MYO1AQ9UBC5 1043 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 AGAP1Q9UPQ3 857 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 LAMA2P24043 3122 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 J3QL48 77 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 ZBTB24O43167 697 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 POMCP01189 267 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 TNFAIP3P21580 790 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 SCNN1GP51170 649 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 AFF1P51825 1210 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 VAV2P52735 878 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 SV2CQ496J9 727 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 CALR3Q96L12 384 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 FAM193BQ96PV7 902 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 DESI2Q9BSY9 194 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 PDCL3Q9H2J4 239 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 RC3H2Q9HBD1 1191 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 TBC1D13Q9NVG8 400 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 ADAMTS1Q9UHI8 967 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 PCDHB4Q9Y5E5 795 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 PCDHA11Q9Y5I1 949 aa11.67□□□□□ -0.54
CCDC90B-218ENST00000533761 CARNS1A5YM72 827 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 GRXCR1A8MXD5 290 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 PTGESO14684 152 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 CST3P01034 146 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 GATMP50440 423 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 MTF1Q14872 753 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 RAB30Q15771 203 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 ZBTB6Q15916 424 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 PAN2Q504Q3 1202 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 GLRA4Q5JXX5 417 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 TMEM270Q6UE05 265 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 TRIM72Q6ZMU5 477 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 FIBCD1Q8N539 461 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 KREMEN1Q96MU8 473 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 UROC1Q96N76 676 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 PPP1R10Q96QC0 940 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 XYLT2Q9H1B5 865 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 MSRAQ9UJ68 235 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 INTUQ9ULD6 942 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 NUB1Q9Y5A7 615 aa11.66□□□□□ -0.54
CCDC90B-218ENST00000533761 ANK1P16157 1881 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 MEFVO15553 781 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CYP26A1O43174 497 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 MED7O43513 233 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CYP11B1P15538 503 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 RPL9P32969 192 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CLCN1P35523 988 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 MAGEA1P43355 309 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 TAF6P49848 677 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 RABGGTBP53611 331 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CDR2Q01850 454 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 TUSC3Q13454 348 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 ASTE1Q2TB18 679 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 LRIT3Q3SXY7 679 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CCDC122Q5T0U0 273 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 SPOPLQ6IQ16 392 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 ALKBH5Q6P6C2 394 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms