RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 LRRTM3Q86VH5 581 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 OR5B17Q8NGF7 314 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ELSPBP1Q96BH3 223 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 BRD9Q9H8M2 597 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 EXOC1Q9NV70 894 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 L1RE1Q9UN81 338 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 UBE4BO95155 1302 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 PTPRJQ12913 1337 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 HCRTO43612 131 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
CAPN1-225ENST00000533704 LRRN2O75325 713 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
CAPN1-225ENST00000533704 MICAL2O94851 1124 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 PTPRDP23468 1912 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 FCARP24071 287 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 GABRR2P28476 465 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 GDI1P31150 447 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 EHHADHQ08426 723 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 MYO1EQ12965 1108 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 DUOXA2Q1HG44 320 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 GPR158Q5T848 1215 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 PHLDB3Q6NSJ2 640 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 VITQ6UXI7 678 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 TPRG1Q6ZUI0 275 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 TMC8Q8IU68 726 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 ADGRF2Q8IZF7 708 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 XXYLT1Q8NBI6 393 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 STKLD1Q8NE28 680 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 PATJQ8NI35 1801 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 SPPL2BQ8TCT7 592 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 PSMG2Q969U7 264 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 HPDLQ96IR7 371 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 ASB16Q96NS5 453 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 GCNAQ96QF7 691 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 TRMT61BQ9BVS5 477 aaKnown RBP11.22□□□□□ -0.61
CAPN1-225ENST00000533704 LRRC3Q9BY71 257 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 KIAA1586Q9HCI6 787 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 TMLHEQ9NVH6 421 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 ASB3Q9Y575 518 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
CAPN1-225ENST00000533704 GREB1Q4ZG55 1949 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 ANAPC1Q9H1A4 1944 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 KANSL1LA0AUZ9 987 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 HEPACAM2A8MVW5 462 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 EXOC3O60645 756 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 HAPLN1P10915 354 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-225ENST00000533704 ATF6P18850 670 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 CMA1P23946 247 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 SYKP43405 635 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 GPR15P49685 360 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 STARD6P59095 220 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 CYP4F8P98187 520 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 PRKCQQ04759 706 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 CYP24A1Q07973 514 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 ANGPT1Q15389 498 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 CCDC142Q17RM4 750 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
CAPN1-225ENST00000533704 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 ARHGAP15Q53QZ3 475 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 SDHAF4Q5VUM1 108 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 WDR49Q8IV35 697 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 YAF2Q8IY57 180 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 TMEM86AQ8N2M4 240 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 FSIP1Q8NA03 581 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 PJA1Q8NG27 643 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 C2orf15Q8WU43 125 aaKnown RBP11.21□□□□□ -0.61
CAPN1-225ENST00000533704 GPR88Q9GZN0 384 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 HEBP1Q9NRV9 189 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-225ENST00000533704 ATP6V1DQ9Y5K8 247 aa11.21□□□□□ -0.61
CAPN1-225ENST00000533704 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.61
CAPN1-225ENST00000533704 COL4A2P08572 1712 aa11.21□□□□□ -0.62
CAPN1-225ENST00000533704 PTPRZ1P23471 2315 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-225ENST00000533704 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 FAM170BA6NMN3 283 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 DPYSL4O14531 572 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 ZNF263O14978 683 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 KLRC4O43908 158 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 PHACTR2O75167 634 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 FGF19O95750 216 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
CAPN1-225ENST00000533704 PSMC3P17980 439 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms