RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CGRRF1Q99675 332 aa23.94■■□□□ 1.42
BEST1-207ENST00000533521 ARHGEF3Q9NR81 526 aa23.94■■□□□ 1.42
BEST1-207ENST00000533521 DMAC2Q9NW81 257 aa23.94■■□□□ 1.42
BEST1-207ENST00000533521 SLC27A5Q9Y2P5 690 aa23.94■■□□□ 1.42
BEST1-207ENST00000533521 PDXKO00764 312 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 CLIC2O15247 247 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 STAU1O95793 577 aaKnown RBP23.93■■□□□ 1.42
BEST1-207ENST00000533521 KRT19P08727 400 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 PCSK1P29120 753 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 STARD6P59095 220 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 PRKCQQ04759 706 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 TCF15Q12870 199 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 BFSP1Q12934 665 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 VEPH1Q14D04 833 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 POTEHQ6S545 545 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 SMARCD2Q92925 531 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 HPDLQ96IR7 371 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 KCTD10Q9H3F6 313 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 ZFP14Q9HCL3 533 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 ZMYM5Q9UJ78 669 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 PCDHB5Q9Y5E4 795 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 SNX9Q9Y5X1 595 aa23.93■■□□□ 1.42
BEST1-207ENST00000533521 RHOBTB3O94955 611 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 RPN1P04843 607 aaKnown RBP23.92■■□□□ 1.42
BEST1-207ENST00000533521 HAPLN1P10915 354 aaPredicted RBP23.92■■□□□ 1.42
BEST1-207ENST00000533521 MYL4P12829 197 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 FCARP24071 287 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 WEE1P30291 646 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 CYP2J2P51589 502 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 AP3M2P53677 418 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 CLDN10P78369 228 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 SOWAHAQ2M3V2 549 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 FAM78AQ5JUQ0 283 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 KRBA2Q6ZNG9 492 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 TTC9BQ8N6N2 239 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 FLCNQ8NFG4 579 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 SHKBP1Q8TBC3 707 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 CHAMP1Q96JM3 812 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 TRPV5Q9NQA5 729 aa23.92■■□□□ 1.42
BEST1-207ENST00000533521 DDX43Q9NXZ2 648 aaKnown RBP23.92■■□□□ 1.42
BEST1-207ENST00000533521 EXOC3O60645 756 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 TNNI1P19237 187 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 DPYDQ12882 1025 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 KCNB1Q14721 858 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 INTS6LQ5JSJ4 861 aaKnown RBP23.91■■□□□ 1.42
BEST1-207ENST00000533521 TANGO2Q6ICL3 276 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 ADGRF2Q8IZF7 708 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 FSIP1Q8NA03 581 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 RDH13Q8NBN7 331 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 DEPDC1BQ8WUY9 529 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 DNASE1L2Q92874 299 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 FUBP3Q96I24 572 aaKnown RBP eCLIP23.91■■□□□ 1.42
BEST1-207ENST00000533521 PKMYT1Q99640 499 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 KXD1Q9BQD3 176 aa23.91■■□□□ 1.42
BEST1-207ENST00000533521 DDX23Q9BUQ8 820 aaKnown RBP23.91■■□□□ 1.42
BEST1-207ENST00000533521 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.9■■□□□ 1.42
BEST1-207ENST00000533521 SOBPA7XYQ1 873 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 ZNF202O95125 648 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 ATICP31939 592 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 NFIL3Q16649 462 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 MGAT5BQ3V5L5 792 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 CEP295NLQ96MC4 621 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 OSBPL6Q9BZF3 934 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 GZF1Q9H116 711 aaPredicted RBP23.9■■□□□ 1.42
BEST1-207ENST00000533521 TBC1D17Q9HA65 648 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 CA14Q9ULX7 337 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 TRAF3IP3Q9Y228 551 aa23.9■■□□□ 1.42
BEST1-207ENST00000533521 DENND4CQ5VZ89 1909 aa23.89■■□□□ 1.42
BEST1-207ENST00000533521 MAPK13O15264 365 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 DLATP10515 647 aaKnown RBP23.89■■□□□ 1.41
BEST1-207ENST00000533521 ATF6P18850 670 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 CFAP221Q4G0U5 840 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 LMBRD2Q68DH5 695 aaPredicted RBP23.89■■□□□ 1.41
BEST1-207ENST00000533521 SCARA3Q6AZY7 606 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 FAM171BQ6P995 826 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 GAREM2Q75VX8 874 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 PARD3BQ8TEW8 1205 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 CCDC127Q96BQ5 260 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 SEPT5Q99719 369 aaPredicted RBP23.89■■□□□ 1.41
BEST1-207ENST00000533521 VRTNQ9H8Y1 702 aa23.89■■□□□ 1.41
BEST1-207ENST00000533521 NUP210Q8TEM1 1887 aaPredicted RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 NRG2O14511 850 aaPredicted RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 TACC1O75410 805 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 WARSP23381 471 aaKnown RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 CDC25CP30307 473 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 RPL10AP62906 217 aaKnown RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 ENPEPQ07075 957 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 TEAD2Q15562 447 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 MAPRE1Q15691 268 aaKnown RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 MLF2Q15773 248 aaPredicted RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 SLC44A4Q53GD3 710 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 CCDC105Q8IYK2 499 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 ZSCAN18Q8TBC5 510 aaPredicted RBP23.88■■□□□ 1.41
BEST1-207ENST00000533521 KBTBD7Q8WVZ9 684 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 ZNF516Q92618 1163 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 ZSWIM3Q96MP5 696 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 PLA2G2FQ9BZM2 168 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 GOLPH3LQ9H4A5 285 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 TMLHEQ9NVH6 421 aa23.88■■□□□ 1.41
BEST1-207ENST00000533521 OBP2AQ9NY56 170 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms