RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 TRPV4Q9HBA0 871 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 LTB4R2Q9NPC1 389 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 HEBP1Q9NRV9 189 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 HSPBP1Q9NZL4 362 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 MRPS17Q9Y2R5 130 aaKnown RBP16.62■□□□□ 0.25
CPSF1-211ENST00000533492 PCDHB5Q9Y5E4 795 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 ZNF263O14978 683 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 LRRN2O75325 713 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 CASP1P29466 404 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 NFE2Q16621 373 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-211ENST00000533492 DUOXA2Q1HG44 320 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 LMBRD2Q68DH5 695 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-211ENST00000533492 EPM2AIP1Q7L775 607 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-211ENST00000533492 CBWD2Q8IUF1 395 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 C1orf210Q8IVY1 113 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 MFSD6LQ8IWD5 586 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 NELFCDQ8IXH7 590 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 TMEM86AQ8N2M4 240 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 RDH13Q8NBN7 331 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 GIPC2Q8TF65 315 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 GCNAQ96QF7 691 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 LPIN3Q9BQK8 851 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 ZNF334Q9HCZ1 680 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-211ENST00000533492 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 GDAP2Q9NXN4 497 aa16.61■□□□□ 0.25
CPSF1-211ENST00000533492 DDX43Q9NXZ2 648 aaKnown RBP16.61■□□□□ 0.25
CPSF1-211ENST00000533492 MTF2Q9Y483 593 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-211ENST00000533492 PVALEFA0A1B0GWK0 134 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 MAN2B1O00754 1011 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 DPYSL4O14531 572 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 HAPLN1P10915 354 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-211ENST00000533492 GLULP15104 373 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 HOXD13P35453 343 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 SNRPFP62306 86 aaKnown RBP16.6■□□□□ 0.25
CPSF1-211ENST00000533492 GPR158Q5T848 1215 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 GAREM2Q75VX8 874 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 HS2ST1Q7LGA3 356 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 ARID3BQ8IVW6 561 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-211ENST00000533492 TOP6BLQ8N6T0 577 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 FAM84AQ96KN4 292 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 SLC39A2Q9NP94 309 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 SPATA6Q9NWH7 488 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-211ENST00000533492 L1RE1Q9UN81 338 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 TSC2P49815 1807 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 UBE4BO95155 1302 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 MIA3Q5JRA6 1907 aa16.6■□□□□ 0.25
CPSF1-211ENST00000533492 CLIC2O15247 247 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 TGFB1I1O43294 461 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 PRPF40AO75400 957 aaKnown RBP16.59■□□□□ 0.25
CPSF1-211ENST00000533492 ATF6P18850 670 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 TNNI1P19237 187 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 CDC25CP30307 473 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 MAGEA9P43362 315 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 LHX1P48742 406 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 CYP2J2P51589 502 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 CUL4BQ13620 913 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
CPSF1-211ENST00000533492 STXBP5Q5T5C0 1151 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 ASCL5Q7RTU5 278 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 WDR49Q8IV35 697 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 OR5B17Q8NGF7 314 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 CXorf38Q8TB03 319 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 SPATA18Q8TC71 538 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 CSGALNACT1Q8TDX6 532 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 SCFD1Q8WVM8 642 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 HPDLQ96IR7 371 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 FNBP1Q96RU3 617 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 PI4K2AQ9BTU6 479 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 SIX4Q9UIU6 781 aa16.59■□□□□ 0.25
CPSF1-211ENST00000533492 PRR23AA6NEV1 266 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 LAMTOR5O43504 91 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 DLATP10515 647 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 ACAT1P24752 427 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 TARSP26639 723 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 PCSK1P29120 753 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 EHHADHQ08426 723 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 INTS6LQ5JSJ4 861 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 ZC3H14Q6PJT7 736 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 DPH6Q7L8W6 267 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 ADGRF2Q8IZF7 708 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 TASP1Q9H6P5 420 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 TMLHEQ9NVH6 421 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 CGNQ9P2M7 1197 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 GTF3C4Q9UKN8 822 aa16.58■□□□□ 0.24
CPSF1-211ENST00000533492 NDRG2Q9UN36 371 aaKnown RBP16.58■□□□□ 0.24
CPSF1-211ENST00000533492 CACNA1IQ9P0X4 2223 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms