RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 MYL4P12829 197 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 PCSK1P29120 753 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 AVPR2P30518 371 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 CCR2P41597 374 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 CLCN5P51795 746 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 AP3M2P53677 418 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 MGAT5BQ3V5L5 792 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 ASTLQ6HA08 431 aaPredicted RBP17.87■□□□□ 0.45
PKP3-209ENST00000533069 ELOA2Q8IYF1 753 aaPredicted RBP17.87■□□□□ 0.45
PKP3-209ENST00000533069 HS6ST3Q8IZP7 471 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 SIX5Q8N196 739 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 TTC9BQ8N6N2 239 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 PSMG2Q969U7 264 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 TCEAL4Q96EI5 215 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 SEPT5Q99719 369 aaPredicted RBP17.87■□□□□ 0.45
PKP3-209ENST00000533069 GPR88Q9GZN0 384 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 DMAC2Q9NW81 257 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 DDX43Q9NXZ2 648 aaKnown RBP17.87■□□□□ 0.45
PKP3-209ENST00000533069 HOOK1Q9UJC3 728 aaKnown RBP17.87■□□□□ 0.45
PKP3-209ENST00000533069 PCDHB5Q9Y5E4 795 aa17.87■□□□□ 0.45
PKP3-209ENST00000533069 GABRDO14764 452 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 CALUO43852 315 aaPredicted RBP17.86■□□□□ 0.45
PKP3-209ENST00000533069 NR3C1P04150 777 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 VCPP55072 806 aaKnown RBP17.86■□□□□ 0.45
PKP3-209ENST00000533069 SOWAHAQ2M3V2 549 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 INTS6LQ5JSJ4 861 aaKnown RBP17.86■□□□□ 0.45
PKP3-209ENST00000533069 LIMS2Q7Z4I7 341 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 LRRTM3Q86VH5 581 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 TMC8Q8IU68 726 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 GPR152Q8TDT2 470 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 ELSPBP1Q96BH3 223 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 KXD1Q9BQD3 176 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 RPP25Q9BUL9 199 aaKnown RBP17.86■□□□□ 0.45
PKP3-209ENST00000533069 LRRC3Q9BY71 257 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 ABI2Q9NYB9 513 aaPredicted RBP17.86■□□□□ 0.45
PKP3-209ENST00000533069 TRAF3IP3Q9Y228 551 aa17.86■□□□□ 0.45
PKP3-209ENST00000533069 MOSPD3O75425 235 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 LETM1O95202 739 aaPredicted RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 STAU1O95793 577 aaKnown RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 HAPLN1P10915 354 aaPredicted RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 ATICP31939 592 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 CLDN10P78369 228 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 PFKPQ01813 784 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 TRPC3Q13507 836 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 SCARA3Q6AZY7 606 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 DNAJB7Q7Z6W7 309 aaPredicted RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 GUF1Q8N442 669 aaKnown RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 ENGASEQ8NFI3 743 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 ST13P5Q8NFI4 369 aaPredicted RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 FAM200AQ8TCP9 573 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 ASB16Q96NS5 453 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 GZF1Q9H116 711 aaPredicted RBP17.85■□□□□ 0.45
PKP3-209ENST00000533069 ARHGEF3Q9NR81 526 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
PKP3-209ENST00000533069 SCN1AP35498 2009 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 SOAT2O75908 522 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 FAM163BP0C2L3 166 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 ATF6P18850 670 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 AOC1P19801 751 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 WARSP23381 471 aaKnown RBP17.84■□□□□ 0.45
PKP3-209ENST00000533069 FCARP24071 287 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 GPC5P78333 572 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 TAF12Q16514 161 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 NFIL3Q16649 462 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 FAM78AQ5JUQ0 283 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 CWF19L1Q69YN2 538 aaKnown RBP17.84■□□□□ 0.45
PKP3-209ENST00000533069 OSTM1Q86WC4 334 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 FLCNQ8NFG4 579 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 GPT2Q8TD30 523 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 PARD3BQ8TEW8 1205 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 KBTBD7Q8WVZ9 684 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 SMARCD2Q92925 531 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 MMS19Q96T76 1030 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 TRPV4Q9HBA0 871 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 ZFP14Q9HCL3 533 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 FRMD4BQ9Y2L6 1034 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 DOCK8Q8NF50 2099 aa17.84■□□□□ 0.45
PKP3-209ENST00000533069 A0A1W2PRU2 124 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 KRBA1A5PL33 1030 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 LRRIQ3A6PVS8 624 aaPredicted RBP17.83■□□□□ 0.44
PKP3-209ENST00000533069 MAPK13O15264 365 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 PHACTR2O75167 634 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.44
PKP3-209ENST00000533069 NPR3P17342 541 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 RFX1P22670 979 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 ACAT1P24752 427 aaKnown RBP17.83■□□□□ 0.44
PKP3-209ENST00000533069 PTPN5P54829 565 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 RPL10AP62906 217 aaKnown RBP17.83■□□□□ 0.44
PKP3-209ENST00000533069 TNNC1P63316 161 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 BIRC3Q13489 604 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 SNW1Q13573 536 aaKnown RBP17.83■□□□□ 0.44
PKP3-209ENST00000533069 TEAD2Q15562 447 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 MAPRE1Q15691 268 aaKnown RBP17.83■□□□□ 0.44
PKP3-209ENST00000533069 CFAP221Q4G0U5 840 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 IER5LQ5T953 404 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 TANGO2Q6ICL3 276 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms