RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 C2orf15Q8WU43 125 aaKnown RBP19.2■□□□□ 0.66
PCF11-206ENST00000533018 RUBCNQ92622 972 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 RSPRY1Q96DX4 576 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 TMEM206Q9H813 350 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
PCF11-206ENST00000533018 PCDHGA2Q9Y5H1 932 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 OTOGLQ3ZCN5 2332 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 NUP210Q8TEM1 1887 aaPredicted RBP19.2■□□□□ 0.66
PCF11-206ENST00000533018 SLC38A8A6NNN8 435 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 CHADO15335 359 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 PRPF6O94906 941 aaKnown RBP19.19■□□□□ 0.66
PCF11-206ENST00000533018 ATF6P18850 670 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 CDC25CP30307 473 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 WNT7BP56706 349 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 TSPY1Q01534 308 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 BRSK2Q8IWQ3 736 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 DCLK2Q8N568 766 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 CSGALNACT2Q8N6G5 542 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 CBWD1Q9BRT8 395 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 FGFBP2Q9BYJ0 223 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 BACH2Q9BYV9 841 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 ZSCAN32Q9NX65 697 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 PCDHB5Q9Y5E4 795 aa19.19■□□□□ 0.66
PCF11-206ENST00000533018 COL4A2P08572 1712 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 EXTL3O43909 919 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 HUS1O60921 280 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 HAPLN1P10915 354 aaPredicted RBP19.18■□□□□ 0.66
PCF11-206ENST00000533018 SOX9P48436 509 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 FCHO2Q0JRZ9 810 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 BFSP1Q12934 665 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 PPP2R5DQ14738 602 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 STXBP4Q6ZWJ1 553 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 C1orf127Q8N9H9 656 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 ZFYVE19Q96K21 471 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 PI4K2AQ9BTU6 479 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 LRRC27Q9C0I9 530 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 TASP1Q9H6P5 420 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 NCDNQ9UBB6 729 aa19.18■□□□□ 0.66
PCF11-206ENST00000533018 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
PCF11-206ENST00000533018 FRMD3A2A2Y4 597 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 ARNTLO00327 626 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 SPTLC2O15270 562 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 PRPF40AO75400 957 aaKnown RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 TMEM191BP0C7N4 346 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 ARHGAP29Q52LW3 1261 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 FOXD4L5Q5VV16 416 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 PDCL2Q8N4E4 241 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 SUMF1Q8NBK3 374 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 LINC00301Q8NCQ3 95 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 FOXD4L4Q8WXT5 416 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 MKNK1Q9BUB5 465 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 SMG9Q9H0W8 520 aaKnown RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 CHRDQ9H2X0 955 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 PRMT8Q9NR22 394 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 DDX43Q9NXZ2 648 aaKnown RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 ITGA11Q9UKX5 1188 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 MAGED2Q9UNF1 606 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 MORC2Q9Y6X9 1032 aaPredicted RBP19.17■□□□□ 0.66
PCF11-206ENST00000533018 DNAH14Q0VDD8 3507 aa19.17■□□□□ 0.66
PCF11-206ENST00000533018 KIF26AQ9ULI4 1882 aaPredicted RBP19.16■□□□□ 0.66
PCF11-206ENST00000533018 PRAMEF12O95522 483 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 ACAT1P24752 427 aaKnown RBP19.16■□□□□ 0.66
PCF11-206ENST00000533018 CCR3P51677 355 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 NRLP54845 237 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 RBP5P82980 135 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 MYL7Q01449 175 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 C1orf228Q6PIY5 440 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 ZNF687Q8N1G0 1237 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 GPD1LQ8N335 351 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 BPIFB1Q8TDL5 484 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 HPS3Q969F9 1004 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 DHX58Q96C10 678 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 MSANTD3Q96H12 275 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 FAM84AQ96KN4 292 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 LRRC3BQ96PB8 259 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 MTMR12Q9C0I1 747 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 TNMDQ9H2S6 317 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 C8orf33Q9H7E9 229 aaPredicted RBP19.16■□□□□ 0.66
PCF11-206ENST00000533018 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 THG1LQ9NWX6 298 aaKnown RBP19.16■□□□□ 0.66
PCF11-206ENST00000533018 GTSE1Q9NYZ3 720 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 L1RE1Q9UN81 338 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 SNX9Q9Y5X1 595 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 GPR179Q6PRD1 2367 aa19.16■□□□□ 0.66
PCF11-206ENST00000533018 SPECC1L-ADORA2AF8WAN1 911 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 CHRNB1P11230 501 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 AVPR1AP37288 418 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 MLLT6P55198 1093 aaPredicted RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 FOXK2Q01167 660 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 AMPD3Q01432 767 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 LRRC32Q14392 662 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 NFE2Q16621 373 aaPredicted RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 FOXD4L6Q3SYB3 417 aaPredicted RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 LMBRD2Q68DH5 695 aaPredicted RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 FOXD4L3Q6VB84 417 aaPredicted RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 TMEM86AQ8N2M4 240 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms