RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 FAM78AQ5JUQ0 283 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 CWF19L1Q69YN2 538 aaKnown RBP18.52■□□□□ 0.56
PHRF1-204ENST00000532550 SCARA3Q6AZY7 606 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 POTEHQ6S545 545 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 C12orf56Q8IXR9 622 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 TOP6BLQ8N6T0 577 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 FSIP1Q8NA03 581 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 PSMG2Q969U7 264 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 ELSPBP1Q96BH3 223 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 ACBD6Q9BR61 282 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 DNAJC25Q9H1X3 360 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 ARHGEF3Q9NR81 526 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 DDX43Q9NXZ2 648 aaKnown RBP18.52■□□□□ 0.56
PHRF1-204ENST00000532550 PCDHB5Q9Y5E4 795 aa18.52■□□□□ 0.56
PHRF1-204ENST00000532550 MOSPD3O75425 235 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 FGF19O95750 216 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 RPN1P04843 607 aaKnown RBP18.51■□□□□ 0.55
PHRF1-204ENST00000532550 NUCB2P80303 420 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 CYP24A1Q07973 514 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 PSMD6Q15008 389 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 TEAD2Q15562 447 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 NFE2Q16621 373 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-204ENST00000532550 DPH6Q7L8W6 267 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 TRAPPC11Q7Z392 1133 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 TTC9BQ8N6N2 239 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 SPATA18Q8TC71 538 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 SMARCD2Q92925 531 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 ZSWIM3Q96MP5 696 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 ASB16Q96NS5 453 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 LRRC3Q9BY71 257 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 PLA2G2FQ9BZM2 168 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 SLITRK6Q9H5Y7 841 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 TBC1D17Q9HA65 648 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 ABI2Q9NYB9 513 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-204ENST00000532550 TSC2P49815 1807 aa18.51■□□□□ 0.55
PHRF1-204ENST00000532550 PTPRJQ12913 1337 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 A0A1W2PRU2 124 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 HAPLN1P10915 354 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-204ENST00000532550 SNW1Q13573 536 aaKnown RBP18.5■□□□□ 0.55
PHRF1-204ENST00000532550 SLC44A4Q53GD3 710 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 PHLDB3Q6NSJ2 640 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 KRBA2Q6ZNG9 492 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 TMC8Q8IU68 726 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 KIAA0895Q8NCT3 520 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 SHKBP1Q8TBC3 707 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 CGRRF1Q99675 332 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 ATXN3LQ9H3M9 355 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 GDPD2Q9HCC8 539 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 CACNA1HO95180 2353 aa18.5■□□□□ 0.55
PHRF1-204ENST00000532550 GOLGA6L4A6NEF3 574 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 H0Y858 1186 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 ZNF202O95125 648 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 KIF20AO95235 890 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 CST3P01034 146 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-204ENST00000532550 ACAT1P24752 427 aaKnown RBP18.49■□□□□ 0.55
PHRF1-204ENST00000532550 PCSK1P29120 753 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 TRPC3Q13507 836 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 SOWAHAQ2M3V2 549 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 ARHGAP15Q53QZ3 475 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 ADGRF2Q8IZF7 708 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 ZSCAN18Q8TBC5 510 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-204ENST00000532550 GIPC2Q8TF65 315 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 ATOH1Q92858 354 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-204ENST00000532550 CCDC34Q96HJ3 373 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 MMS19Q96T76 1030 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 LPIN3Q9BQK8 851 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 TRMT61BQ9BVS5 477 aaKnown RBP18.49■□□□□ 0.55
PHRF1-204ENST00000532550 TMLHEQ9NVH6 421 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 SIT1Q9Y3P8 196 aa18.49■□□□□ 0.55
PHRF1-204ENST00000532550 PDXKO00764 312 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 NRG2O14511 850 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-204ENST00000532550 GABRDO14764 452 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 FCARP24071 287 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 GABRR2P28476 465 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 STARD6P59095 220 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 PRKCQQ04759 706 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 INTS6LQ5JSJ4 861 aaKnown RBP18.48■□□□□ 0.55
PHRF1-204ENST00000532550 OSTM1Q86WC4 334 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 E2F7Q96AV8 911 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 PI4K2AQ9BTU6 479 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 BRD9Q9H8M2 597 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 ZNF334Q9HCZ1 680 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-204ENST00000532550 GTF3C4Q9UKN8 822 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 PIEZO1Q92508 2521 aa18.48■□□□□ 0.55
PHRF1-204ENST00000532550 PHACTR2O75167 634 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 PSMC3P17980 439 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 ATF6P18850 670 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 HOXD11P31277 338 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-204ENST00000532550 VIPR2P41587 438 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 DPYDQ12882 1025 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 GRM2Q14416 872 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 MLF2Q15773 248 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-204ENST00000532550 GAREM2Q75VX8 874 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 ALYREFQ86V81 257 aaKnown RBP18.47■□□□□ 0.55
PHRF1-204ENST00000532550 SPATA2LQ8IUW3 424 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-204ENST00000532550 SLC9A9Q8IVB4 645 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 DTWD2Q8NBA8 298 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 ZNF516Q92618 1163 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 GCNAQ96QF7 691 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 KCTD10Q9H3F6 313 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms