RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 RBP3P10745 1247 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 FDFT1P37268 417 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 KPNA1P52294 538 aaPredicted RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 CALCRLQ16602 461 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 PCNX4Q63HM2 1172 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 FOXR2Q6PJQ5 311 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 USP17L1Q7RTZ2 530 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 COX4I2Q96KJ9 171 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 CSRNP1Q96S65 589 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 CCT7Q99832 543 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 NUP85Q9BW27 656 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 PLGRKTQ9HBL7 147 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 TYW1Q9NV66 732 aaKnown RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 TRNAU1APQ9NX07 287 aaKnown RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 TMEM260Q9NX78 707 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 INPP5FQ9Y2H2 1132 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 FRMPD4Q14CM0 1322 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 FUCA1P04066 466 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 EIF2B2P49770 351 aaKnown RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 NKX1-1Q15270 411 aaPredicted RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 ADRM1Q16186 407 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 LMBRD2Q68DH5 695 aaPredicted RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 POTEHQ6S545 545 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 AMIGO2Q86SJ2 522 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 EFCAB3Q8N7B9 438 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SLC5A5Q92911 643 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 HERPUD2Q9BSE4 406 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 TPK1Q9H3S4 243 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 A0A088AWK7 358 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 E9PMD0 336 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SLC18A1P54219 525 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SLC25A3Q00325 362 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SNAPC2Q13487 334 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 GRM4Q14833 912 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 RABGAP1LQ5R372 815 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SUSD4Q5VX71 490 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 KRT79Q5XKE5 535 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 CROCCP3Q8IVE0 287 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SYT11Q9BT88 431 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 MXD3Q9BW11 206 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 MRPS26Q9BYN8 205 aaKnown RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 VPS37BQ9H9H4 285 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 DNAJC12Q9UKB3 198 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 LRP5O75197 1615 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 CAPN14A8MX76 684 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 DNAJA2O60884 412 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 TDP2O95551 362 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 METTL21CQ5VZV1 264 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 ADGRG6Q86SQ4 1221 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 C12orf50Q8NA57 414 aaPredicted RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 PIGBQ92521 554 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 SLC35C1Q96A29 364 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 DYNLL2Q96FJ2 89 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 VPS50Q96JG6 964 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 ZFRQ96KR1 1074 aaKnown RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 DRC3Q9H069 523 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 GPC6Q9Y625 555 aaPredicted RBP14.84□□□□□ -0.03
PCF11-204ENST00000530660 MAD1L1Q9Y6D9 718 aa14.84□□□□□ -0.03
PCF11-204ENST00000530660 MYH14Q7Z406 1995 aaKnown RBP14.83□□□□□ -0.03
PCF11-204ENST00000530660 C1orf167Q5SNV9 1468 aa14.83□□□□□ -0.03
PCF11-204ENST00000530660 PAPPAQ13219 1627 aa14.83□□□□□ -0.03
PCF11-204ENST00000530660 SPECC1L-ADORA2AF8WAN1 911 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 USP17L8P0C7I0 530 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 RAG1P15918 1043 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 DCAF6Q58WW2 860 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 IZUMO3Q5VZ72 239 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 ITPRIPL1Q6GPH6 555 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 C11orf63Q6NUN7 778 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 IFNLR1Q8IU57 520 aaPredicted RBP14.83□□□□□ -0.04
PCF11-204ENST00000530660 PLVAPQ9BX97 442 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 BCS1LQ9Y276 419 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 PCDHB13Q9Y5F0 798 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 CLIC2O15247 247 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 OCM2P0CE71 109 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 OCMP0CE72 109 aaPredicted RBP14.83□□□□□ -0.04
PCF11-204ENST00000530660 PTK6Q13882 451 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 CCNIQ14094 377 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 RALGPS1Q5JS13 557 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 EFHC1Q5JVL4 640 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 C16orf87Q6PH81 154 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 PRPF39Q86UA1 669 aaKnown RBP14.83□□□□□ -0.04
PCF11-204ENST00000530660 RHOT2Q8IXI1 618 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 CPNE9Q8IYJ1 553 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 MARVELD2Q8N4S9 558 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 SCAIQ8N9R8 606 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 NDEL1Q9GZM8 345 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 CACNA1SQ13698 1873 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 KIF13BQ9NQT8 1826 aa14.83□□□□□ -0.04
PCF11-204ENST00000530660 CD48P09326 243 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 THRAP10827 490 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 BGNP21810 368 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 CIITAP33076 1130 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 BCAP31P51572 246 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 NSMFQ6X4W1 530 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
PCF11-204ENST00000530660 FRMD5Q7Z6J6 570 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 ERI1Q8IV48 349 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms