RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 SLC27A5Q9Y2P5 690 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 TMEM221A6NGB7 291 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 ANHXE9PGG2 379 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 M0R296 226 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 FAM163BP0C2L3 166 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 PSMC2P35998 433 aaKnown RBP18.3■□□□□ 0.52
CCS-205ENST00000530384 PRCPP42785 496 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 EPHA5P54756 1037 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 UBE2HP62256 183 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 TNNC1P63316 161 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 ENPEPQ07075 957 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 SLC5A9Q2M3M2 681 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 WDR72Q3MJ13 1102 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 INTS6LQ5JSJ4 861 aaKnown RBP18.3■□□□□ 0.52
CCS-205ENST00000530384 PRSS36Q5K4E3 855 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 MTSS1LQ765P7 747 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 BMP8AQ7Z5Y6 402 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 ITIH5Q86UX2 942 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 ERCC4Q92889 916 aaPredicted RBP18.3■□□□□ 0.52
CCS-205ENST00000530384 MMS19Q96T76 1030 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 SEPT5Q99719 369 aaPredicted RBP18.3■□□□□ 0.52
CCS-205ENST00000530384 PCDHB5Q9Y5E4 795 aa18.3■□□□□ 0.52
CCS-205ENST00000530384 AKAP3O75969 853 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 C4BPAP04003 597 aaKnown RBP18.29■□□□□ 0.52
CCS-205ENST00000530384 KRT13P13646 458 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 WARSP23381 471 aaKnown RBP18.29■□□□□ 0.52
CCS-205ENST00000530384 VAMP7P51809 220 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 MYL6P60660 151 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 STIM1Q13586 685 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 HTR4Q13639 388 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 VEPH1Q14D04 833 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 MGAT5BQ3V5L5 792 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 TDRD10Q5VZ19 366 aaKnown RBP18.29■□□□□ 0.52
CCS-205ENST00000530384 OSTM1Q86WC4 334 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 FAM186BQ8IYM0 893 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 TTC9BQ8N6N2 239 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 KBTBD7Q8WVZ9 684 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 ING5Q8WYH8 240 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 ASIC4Q96FT7 647 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 TSG101Q99816 390 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 MKNK1Q9BUB5 465 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 VRTNQ9H8Y1 702 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 ABI2Q9NYB9 513 aaPredicted RBP18.29■□□□□ 0.52
CCS-205ENST00000530384 DUSP12Q9UNI6 340 aa18.29■□□□□ 0.52
CCS-205ENST00000530384 CETN3O15182 167 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 TACC1O75410 805 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 HAPLN1P10915 354 aaPredicted RBP18.28■□□□□ 0.52
CCS-205ENST00000530384 MYL4P12829 197 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 COL9A1P20849 921 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
CCS-205ENST00000530384 PPP1R2P41236 205 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 DLG4P78352 724 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 NCOA4Q13772 614 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 ZACNQ401N2 412 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 HFE2Q6ZVN8 426 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 HS6ST3Q8IZP7 471 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 SLC44A3Q8N4M1 653 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 RSAD2Q8WXG1 361 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 PSMG2Q969U7 264 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 PBXIP1Q96AQ6 731 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 XYLT2Q9H1B5 865 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 ABCB6Q9NP58 842 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 NUMBLQ9Y6R0 609 aa18.28■□□□□ 0.52
CCS-205ENST00000530384 SOAT2O75908 522 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 CLSTN1O94985 981 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 FGF19O95750 216 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 CEBPBP17676 345 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 MAPRE1Q15691 268 aaKnown RBP18.27■□□□□ 0.52
CCS-205ENST00000530384 ZNF699Q32M78 642 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 ZNF667Q5HYK9 610 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 SV2AQ7L0J3 742 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 DNAJB7Q7Z6W7 309 aaPredicted RBP18.27■□□□□ 0.52
CCS-205ENST00000530384 ADSSL1Q8N142 457 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 FAM200AQ8TCP9 573 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 TCEAL4Q96EI5 215 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 MCRS1Q96EZ8 462 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 FUBP3Q96I24 572 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCS-205ENST00000530384 PKMYT1Q99640 499 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 SYT15Q9BQS2 421 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 SNX25Q9H3E2 840 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 TMLHEQ9NVH6 421 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 MAN1B1Q9UKM7 699 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 GTF3C4Q9UKN8 822 aa18.27■□□□□ 0.52
CCS-205ENST00000530384 PSMA7O14818 248 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 VNN1O95497 513 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 EPB41P11171 864 aaKnown RBP18.26■□□□□ 0.51
CCS-205ENST00000530384 P4HA1P13674 534 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 ATF6P18850 670 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 GNL1P36915 607 aaPredicted RBP18.26■□□□□ 0.51
CCS-205ENST00000530384 CCR2P41597 374 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
CCS-205ENST00000530384 LRRC63Q05C16 580 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 TAF12Q16514 161 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 SGSM1Q2NKQ1 1148 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 CFAP221Q4G0U5 840 aa18.26■□□□□ 0.51
CCS-205ENST00000530384 FAM171BQ6P995 826 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms