RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 TRIM33Q9UPN9 1127 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 HAUS5O94927 633 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 SRGAP2BP0DMP2 458 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 TTC27Q6P3X3 843 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 CCDC125Q86Z20 511 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 NUDCD3Q8IVD9 361 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 SCN4BQ8IWT1 228 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 A0A0A6YYK5 440 aaPredicted RBP12.97□□□□□ -0.33
SCN3B-206ENST00000530277 B4GALT5O43286 388 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 TTC4O95801 387 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 CCNA1P78396 465 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
SCN3B-206ENST00000530277 ASTE1Q2TB18 679 aaPredicted RBP12.97□□□□□ -0.33
SCN3B-206ENST00000530277 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 SLCO1B3Q9NPD5 702 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 P4HA2O15460 535 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 PTK7Q13308 1070 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 TMEM132DQ14C87 1099 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 TDRD10Q5VZ19 366 aaKnown RBP12.97□□□□□ -0.33
SCN3B-206ENST00000530277 FAM131BQ86XD5 332 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 APOBEC3FQ8IUX4 373 aaKnown RBP12.97□□□□□ -0.33
SCN3B-206ENST00000530277 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 ARMC2Q8NEN0 867 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 MORC4Q8TE76 937 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 GPRASP2Q96D09 838 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 FAM129AQ9BZQ8 928 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
SCN3B-206ENST00000530277 NEMP1O14524 444 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 ZNF862O60290 1169 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 CRCPO75575 148 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 EFNA5P52803 228 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 VSIG10LQ86VR7 867 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 SIX2Q9NPC8 291 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 NOP53Q9NZM5 478 aaKnown RBP12.96□□□□□ -0.33
SCN3B-206ENST00000530277 DUOX1Q9NRD9 1551 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 RBAK-RBAKDNI3L0D1 243 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 CYP2C8P10632 490 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 ABCG1P45844 678 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 FNTAP49354 379 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 DRP2Q13474 957 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 HYIQ5T013 277 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 ARHGAP24Q8N264 748 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 LRRC57Q8N9N7 239 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 PCDHA3Q9Y5H8 950 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 OGTO15294 1046 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 GSTA1P08263 222 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 GSTA2P09210 222 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 NRLP54845 237 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 CAV1Q03135 178 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 LAMTOR4Q0VGL1 99 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 SLC12A1Q13621 1099 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 C15orf59Q2T9L4 293 aaPredicted RBP12.96□□□□□ -0.33
SCN3B-206ENST00000530277 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 RUBCNQ92622 972 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 SGSM3Q96HU1 749 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 NINJ2Q9NZG7 142 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 PCDHA2Q9Y5H9 948 aa12.96□□□□□ -0.33
SCN3B-206ENST00000530277 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
SCN3B-206ENST00000530277 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 HUS1O60921 280 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 FECHP22830 423 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.34
SCN3B-206ENST00000530277 POU5F1BQ06416 359 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 SURF1Q15526 300 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 MAP4K3Q8IVH8 894 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 ARID3BQ8IVW6 561 aaPredicted RBP12.96□□□□□ -0.34
SCN3B-206ENST00000530277 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.34
SCN3B-206ENST00000530277 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.34
SCN3B-206ENST00000530277 CFHP08603 1231 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 CES3Q6UWW8 571 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 NPNTQ6UXI9 565 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 FAM71AQ8IYT1 594 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 ADAM32Q8TC27 787 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 NOD2Q9HC29 1040 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
SCN3B-206ENST00000530277 TULP2O00295 520 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 CST3P01034 146 aaPredicted RBP12.95□□□□□ -0.34
SCN3B-206ENST00000530277 GLRA2P23416 452 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 TYK2P29597 1187 aa12.95□□□□□ -0.34
SCN3B-206ENST00000530277 GOLGA7BQ2TAP0 167 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms