RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 C6orf222P0C671 652 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 MUTP22033 750 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 AKT1P31749 480 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 RAB14P61106 215 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 TDRD10Q5VZ19 366 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 CATSPER3Q86XQ3 398 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 SLC25A41Q8N5S1 370 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 UBA3Q8TBC4 463 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 MTIF3Q9H2K0 278 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 RANBP17Q9H2T7 1088 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 ZFYVE1Q9HBF4 777 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 KCNH7Q9NS40 1196 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.87□□□□□ -0.992e-7■■□□□ 14.4
CTNND1-221ENST00000529873 CAB39Q9Y376 341 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 PCDHB2Q9Y5E7 798 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 CCDC78A2IDD5 438 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 PRRG1O14668 218 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 POLBP06746 335 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 FCGRTP55899 365 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 KIZQ2M2Z5 673 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 ARHGAP15Q53QZ3 475 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 SMIM5Q71RC9 77 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 PPIL6Q8IXY8 311 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 TAGAPQ8N103 731 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 AGBL1Q96MI9 1066 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 TAAR1Q96RJ0 339 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 CCL15-CCL14A0A0B4J2E2 113 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 H7C4K7 107 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 GOLGA8RI6L899 631 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 H2AFYO75367 372 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 APRTP07741 180 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 OCM2P0CE71 109 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 OCMP0CE72 109 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 HSPA1AP0DMV8 641 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 HSPA1BP0DMV9 641 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 C4BPBP20851 252 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 COMTP21964 271 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 SPRP35270 261 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 SLC20A2Q08357 652 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 SFSWAPQ12872 951 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 CCDC85BQ15834 202 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 PCSK7Q16549 785 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 CCL15Q16663 113 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 MGAT5BQ3V5L5 792 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 PPP4R4Q6NUP7 873 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 CLEC10AQ8IUN9 316 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 MRPL1Q9BYD6 325 aaKnown RBP8.87□□□□□ -0.99
CTNND1-221ENST00000529873 C10orf88Q9H8K7 445 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 C17orf75Q9HAS0 396 aa8.87□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF263O14978 683 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 WDR47O94967 919 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 RALBP11234 206 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 CYP2C9P11712 490 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 FDFT1P37268 417 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
CTNND1-221ENST00000529873 TAF6P49848 677 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 GTF2A2P52657 109 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 WASHC5Q12768 1159 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 SPDYAQ5MJ70 313 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 ACAD10Q6JQN1 1059 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF280DQ6N043 979 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 ATP6V0D2Q8N8Y2 350 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 AURKCQ9UQB9 309 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 PREX1Q8TCU6 1659 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 PJA2O43164 708 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 RFX5P48382 616 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-221ENST00000529873 PPP3CCP48454 512 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 STK4Q13043 487 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 PTK6Q13882 451 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 AARS2Q5JTZ9 985 aaKnown RBP8.86□□□□□ -0.99
CTNND1-221ENST00000529873 RRM2BQ7LG56 351 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 LINC00523Q86TU6 105 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 HPDLQ96IR7 371 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 TMEM39BQ9GZU3 492 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 MRGBPQ9NV56 204 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 DBR1Q9UK59 544 aaKnown RBP8.86□□□□□ -0.99
CTNND1-221ENST00000529873 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 NRXN1Q9ULB1 1477 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 RAD51CO43502 376 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 NBNO60934 754 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 ITGA8P53708 1063 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 DEFA1P59665 94 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 DEFA3P59666 94 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 Q4G0T1 1027 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 CYP4A22Q5TCH4 519 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 SAMD3Q8N6K7 520 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 RFWD2Q8NHY2 731 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 FAM162AQ96A26 154 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-221ENST00000529873 SPATA16Q9BXB7 569 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 MTO1Q9Y2Z2 717 aaKnown RBP8.86□□□□□ -0.99
CTNND1-221ENST00000529873 FAM47DPA6NHR8 397 aa8.86□□□□□ -0.99
CTNND1-221ENST00000529873 KLHL2O95198 593 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms