RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 HUS1O60921 280 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 LDHAP00338 332 aaKnown RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 ACAT1P24752 427 aaKnown RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 CDC25CP30307 473 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 PNPLA4P41247 253 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 GPR15P49685 360 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 PPP2R5DQ14738 602 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 SDHAF4Q5VUM1 108 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 LMBRD2Q68DH5 695 aaPredicted RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 NT5DC4Q86YG4 428 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 BRSK2Q8IWQ3 736 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 C1orf127Q8N9H9 656 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 SPPL2BQ8TCT7 592 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 HPS3Q969F9 1004 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 LRRC3BQ96PB8 259 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 MKNK1Q9BUB5 465 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 CHRDQ9H2X0 955 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 TASP1Q9H6P5 420 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 PDE11AQ9HCR9 933 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 TRPV5Q9NQA5 729 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 TMLHEQ9NVH6 421 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 DDX43Q9NXZ2 648 aaKnown RBP14□□□□□ -0.17
CPSF1-204ENST00000529288 GTSE1Q9NYZ3 720 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 HSFX1Q9UBD0 423 aa14□□□□□ -0.17
CPSF1-204ENST00000529288 EXTL3O43909 919 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 PRAMEF12O95522 483 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 TMEM191BP0C7N4 346 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 GARTP22102 1010 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 MYL7Q01449 175 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 POU5F1Q01860 360 aaKnown RBP13.99□□□□□ -0.17
CPSF1-204ENST00000529288 SMARCB1Q12824 385 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 ALCAMQ13740 583 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 LPAL2Q16609 132 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 ARHGAP29Q52LW3 1261 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 SCARA3Q6AZY7 606 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 PDCL2Q8N4E4 241 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 SUMF1Q8NBK3 374 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 BPIFB1Q8TDL5 484 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 C2orf15Q8WU43 125 aaKnown RBP13.99□□□□□ -0.17
CPSF1-204ENST00000529288 SECISBP2LQ93073 1101 aaKnown RBP13.99□□□□□ -0.17
CPSF1-204ENST00000529288 DHX58Q96C10 678 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 RMDN1Q96DB5 314 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 SLC46A2Q9BY10 475 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 C8orf33Q9H7E9 229 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-204ENST00000529288 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 OLFML3Q9NRN5 406 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 THG1LQ9NWX6 298 aaKnown RBP13.99□□□□□ -0.17
CPSF1-204ENST00000529288 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 SNX9Q9Y5X1 595 aa13.99□□□□□ -0.17
CPSF1-204ENST00000529288 PTPRZ1P23471 2315 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-204ENST00000529288 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ARNTLO00327 626 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 SPTLC2O15270 562 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 CHRNB1P11230 501 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 AVPR1AP37288 418 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 CXCL12P48061 93 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 CCR3P51677 355 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ASIC1P78348 528 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 RBP5P82980 135 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 SATB1Q01826 763 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 TNK2Q07912 1038 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 FCHO2Q0JRZ9 810 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 LRRC32Q14392 662 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 PON2Q15165 354 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 DDR2Q16832 855 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 SCN4BQ8IWT1 228 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ZNF687Q8N1G0 1237 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 GPD1LQ8N335 351 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 MAB21L3Q8N8X9 362 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ZBTB44Q8NCP5 570 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 GLIS3Q8NEA6 775 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ANKRD36BP1Q96IX9 119 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 ZNF396Q96N95 335 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-204ENST00000529288 MTMR12Q9C0I1 747 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 LRRC27Q9C0I9 530 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 IL21Q9HBE4 155 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 PRMT8Q9NR22 394 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-204ENST00000529288 RAB23Q9ULC3 237 aa13.98□□□□□ -0.17
CPSF1-204ENST00000529288 SMG5Q9UPR3 1016 aaKnown RBP13.98□□□□□ -0.17
CPSF1-204ENST00000529288 PDCD11Q14690 1871 aaKnown RBP13.97□□□□□ -0.17
CPSF1-204ENST00000529288 HCRTO43612 131 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 TNNC2P02585 160 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 CYP2F1P24903 491 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 NASPP49321 788 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-204ENST00000529288 NRLP54845 237 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 NFE2Q16621 373 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-204ENST00000529288 TXNDC8Q6A555 127 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 HEATR6Q6AI08 1181 aaKnown RBP13.97□□□□□ -0.17
CPSF1-204ENST00000529288 TXNDC11Q6PKC3 985 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 PRR23BQ6ZRT6 265 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 OSTM1Q86WC4 334 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 SPATA2LQ8IUW3 424 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-204ENST00000529288 ADGRF2Q8IZF7 708 aa13.97□□□□□ -0.17
CPSF1-204ENST00000529288 CELF5Q8N6W0 485 aaKnown RBP13.97□□□□□ -0.17
CPSF1-204ENST00000529288 LRRC52Q8N7C0 313 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms