RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 CLCNKBP51801 687 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ZXDAP98168 799 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 GTF2BQ00403 316 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 POU5F1Q01860 360 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 SOX4Q06945 474 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 SIGLEC14Q08ET2 396 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 RAD51AP2Q09MP3 1159 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 PSMD5Q16401 504 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 KYAT1Q16773 422 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 GLRA4Q5JXX5 417 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ATAT1Q5SQI0 421 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 DCLRE1AQ6PJP8 1040 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 CD300LGQ6UXG3 332 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 TMC5Q6UXY8 1006 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 CCDC149Q6ZUS6 474 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 HAUS6Q7Z4H7 955 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 UBALD2Q8IYN6 164 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 C12orf76Q8N812 135 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 LNX1Q8TBB1 728 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 RIN2Q8WYP3 895 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ZNF707Q96C28 371 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ASIC4Q96FT7 647 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 RPGRIP1Q96KN7 1286 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 B3GALT6Q96L58 329 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ZMAT2Q96NC0 199 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ACAP3Q96P50 834 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 APOL5Q9BWW9 433 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 STRA6Q9BX79 667 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 GSX2Q9BZM3 304 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 PLEKHA5Q9HAU0 1116 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ANKFY1Q9P2R3 1169 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 MTRRQ9UBK8 725 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 CACNG4Q9UBN1 327 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 SEL1LQ9UBV2 794 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 TBX20Q9UMR3 447 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 BACE2Q9Y5Z0 518 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 CLUHO75153 1309 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 CITO14578 2027 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 KMT2EQ8IZD2 1858 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 A0A0B4J269 797 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 NPHP3-ACAD11A0A0J9YXS1 232 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 TTC26A0AVF1 554 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 K7ENM7 598 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 PODXLO00592 558 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 SYN3O14994 580 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 CLDN3O15551 220 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 B3GAT3O94766 335 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 MAP3K6O95382 1288 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 YEATS4O95619 227 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 CLTAP09496 248 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 HNRNPA1P09651 372 aaKnown RBP eCLIP7.69□□□□□ -1.18
ITGB1-218ENST00000528877 CYP3A5P20815 502 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 LRPAP1P30533 357 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 PLA2G5P39877 138 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 MTMR3Q13615 1198 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 RAB33AQ14088 237 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 ZBTB6Q15916 424 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 SLC10A6Q3KNW5 377 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 COX20Q5RI15 118 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 FAM171A1Q5VUB5 890 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 SLC8B1Q6J4K2 584 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 SLC39A4Q6P5W5 647 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 HFE2Q6ZVN8 426 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 USP49Q70CQ1 688 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 OTOP3Q7RTS5 596 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 RASSF8Q8NHQ8 419 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 HASPINQ8TF76 798 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 STAMQ92783 540 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 EPSTI1Q96J88 318 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 USP28Q96RU2 1077 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 PLIN2Q99541 437 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 CLSTN3Q9BQT9 956 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 HAPLN2Q9GZV7 340 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 GOLGA2P5Q9HBQ8 144 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 WDR6Q9NNW5 1121 aaKnown RBP7.69□□□□□ -1.18
ITGB1-218ENST00000528877 OLFML3Q9NRN5 406 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 EPS15L1Q9UBC2 864 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 CCDC39Q9UFE4 941 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 SORCS3Q9UPU3 1222 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 STYXL1Q9Y6J8 313 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 CACNA1HO95180 2353 aa7.69□□□□□ -1.18
ITGB1-218ENST00000528877 TSC2P49815 1807 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 MTCL1Q9Y4B5 1905 aaKnown RBP7.68□□□□□ -1.18
ITGB1-218ENST00000528877 A0A087X0B3 334 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 TMEM221A6NGB7 291 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 M0R296 226 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 OGTO15294 1046 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 TBC1D4O60343 1298 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 N4BP1O75113 896 aaKnown RBP7.68□□□□□ -1.18
ITGB1-218ENST00000528877 PPP6R2O75170 966 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 FAM13AO94988 1023 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 WEE2P0C1S8 567 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 CXCL8P10145 99 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 GAP43P17677 238 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 PAX3P23760 479 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 MARCKSP29966 332 aaPredicted RBP7.68□□□□□ -1.18
ITGB1-218ENST00000528877 LIG4P49917 911 aa7.68□□□□□ -1.18
ITGB1-218ENST00000528877 PPP2R3AQ06190 1150 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms