RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 RIC8BQ9NVN3 520 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 GID8Q9NWU2 228 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 A0A0A6YYK5 440 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-219ENST00000528621 CCL15-CCL14A0A0B4J2E2 113 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 GOLGA8RI6L899 631 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 HMGB3O15347 200 aaKnown RBP8.87□□□□□ -0.99
CTNND1-219ENST00000528621 APRTP07741 180 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 COMTP21964 271 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 BRD2P25440 801 aaKnown RBP8.87□□□□□ -0.99
CTNND1-219ENST00000528621 GEMIN4P57678 1058 aaKnown RBP8.87□□□□□ -0.99
CTNND1-219ENST00000528621 PCSK7Q16549 785 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 CCL15Q16663 113 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 MGAT5BQ3V5L5 792 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 AASDHQ4L235 1098 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-219ENST00000528621 PPP4R4Q6NUP7 873 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 CLEC10AQ8IUN9 316 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
CTNND1-219ENST00000528621 DNAJC7Q99615 494 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 KLC4Q9NSK0 619 aa8.87□□□□□ -0.99
CTNND1-219ENST00000528621 CYP2C9P11712 490 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 MAGEA4P43358 317 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 NAMPTP43490 491 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 GEMP55040 296 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CUL2Q13617 745 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 SPDYAQ5MJ70 313 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 OSBPL8Q9BZF1 889 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 AURKCQ9UQB9 309 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 PJA2O43164 708 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CYP11B2P19099 503 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 GARTP22102 1010 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 PPP3CCP48454 512 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 STK4Q13043 487 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 MYBPC2Q14324 1141 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 AARS2Q5JTZ9 985 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 LRRC8BQ6P9F7 803 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 RRM2BQ7LG56 351 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ANKRD13AQ8IZ07 590 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 HPDLQ96IR7 371 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 FAR2Q96K12 515 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 XPO6Q96QU8 1125 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 TMEM39BQ9GZU3 492 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 DBR1Q9UK59 544 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 DSEQ9UL01 958 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 HPS5Q9UPZ3 1129 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CDY2AQ9Y6F7 541 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CDY1Q9Y6F8 540 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 TECPR2O15040 1411 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 NKRFO15226 690 aaKnown RBP eCLIP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 RAD51CO43502 376 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 PRLRP16471 622 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ATICP31939 592 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ITGA8P53708 1063 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 SKIV2LQ15477 1246 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 BOLA3Q53S33 107 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CYP4A22Q5TCH4 519 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 TIGD7Q6NT04 549 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 RFWD2Q8NHY2 731 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 FAM162AQ96A26 154 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 SALL1Q9NSC2 1324 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 LRRIQ3A6PVS8 624 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ZNF263O14978 683 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 KPNA6O60684 536 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 WEE2P0C1S8 567 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CYP2B6P20813 491 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 STIP1P31948 543 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 OR1G1P47890 313 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 PDIA6Q15084 440 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 KBTBD12Q3ZCT8 623 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 GLB1LQ6UWU2 654 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 HNRNPLLQ8WVV9 542 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ERP44Q9BS26 406 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 C17orf80Q9BSJ5 609 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 COLEC11Q9BWP8 271 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 RBM12Q9NTZ6 932 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 FAM49BQ9NUQ9 324 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.86□□□□□ -0.993e-7■■□□□ 14.4
CTNND1-219ENST00000528621 ZBTB12Q9Y330 459 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 PKP3Q9Y446 797 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 SYNDIG1LA6NDD5 238 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 GPR182O15218 404 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 TBC1D4O60343 1298 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 CTDNEP1O95476 244 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 FDPSP14324 419 aaKnown RBP8.86□□□□□ -0.99
CTNND1-219ENST00000528621 SLC9A1P19634 815 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ALDH1A3P47895 512 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 ITPK1Q13572 414 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 MEI1Q5TIA1 1274 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 PCNX4Q63HM2 1172 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 RFX8Q6ZV50 586 aa8.86□□□□□ -0.99
CTNND1-219ENST00000528621 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms