RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 KRT17Q04695 432 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MRPL58Q14197 206 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 USP41Q3LFD5 358 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZNF394Q53GI3 561 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 OVOS1Q6IE37 1185 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TMEM270Q6UE05 265 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 METTL23Q86XA0 190 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RBBP8NLQ8NC74 664 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SPPL3Q8TCT6 385 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 HERC2P3Q9BVR0 1158 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SNX25Q9H3E2 840 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FAM124BQ9H5Z6 455 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 IMPACTQ9P2X3 320 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MYO6Q9UM54 1294 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MUC3AQ02505 3323 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 A8MXQ7 604 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 AKR1B15C9JRZ8 316 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CYP26A1O43174 497 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZNF500O60304 480 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 LPXNO60711 386 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GFPT2O94808 682 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ACAT1P24752 427 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DNAJB1P25685 340 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 STAT1P42224 750 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 LHX1P48742 406 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 YWHAHQ04917 246 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 KIAA0319Q5VV43 1072 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PRSS55Q6UWB4 352 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 VPS52Q8N1B4 723 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TTC39CQ8N584 583 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TC2NQ8N9U0 490 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SLC4A11Q8NBS3 891 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZNF397Q8NF99 534 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SPATA18Q8TC71 538 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ARNTL2Q8WYA1 636 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GRM6O15303 877 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 TBC1D4O60343 1298 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ATP2C2O75185 946 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 TPM1P09493 284 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 GLUD2P49448 558 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 DSG1Q02413 1049 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ARID5BQ14865 1188 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 CCDC142Q17RM4 750 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 RSPO2Q6UXX9 243 aaPredicted RBP12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ACOT1Q86TX2 421 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 UNC93AQ86WB7 457 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 OR10T2Q8NGX3 314 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 LNX1Q8TBB1 728 aaPredicted RBP12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 MYLIPQ8WY64 445 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 TMEM176AQ96HP8 235 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 TMEM209Q96SK2 561 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 DNAJC7Q99615 494 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 NT5C1AQ9BXI3 368 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ZBP1Q9H171 429 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 LZTS1Q9Y250 596 aa12.96□□□□□ -0.34
TRAF3IP2-211ENST00000528599 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 GOLGA6L6A8MZA4 724 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 H3BNC9 293 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 C2CD2LO14523 706 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 PTMAP06454 111 aaKnown RBP12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 MSNP26038 577 aaKnown RBP12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ERVFC1P60507 584 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ARID5AQ03989 594 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 GPM6BQ13491 265 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 CAMK1Q14012 370 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 CTXN3Q4LDR2 81 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 SLC47A2Q86VL8 602 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 CNGA4Q8IV77 575 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 THEM5Q8N1Q8 247 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 OR8K1Q8NGG5 319 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 POF1BQ8WVV4 589 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ZSWIM1Q9BR11 485 aa12.95□□□□□ -0.34
TRAF3IP2-211ENST00000528599 ACBD6Q9BR61 282 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms