RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 RSPH10BP0C881 870 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 FNTAP49354 379 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ARFIP2P53365 341 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ACTR2P61160 394 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 NME3Q13232 169 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 RIBC1Q8N443 379 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 DCLK2Q8N568 766 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 OR9Q1Q8NGQ5 310 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CYTH2Q99418 400 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ASCC2Q9H1I8 757 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 TRABDQ9H4I3 376 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 OLFML3Q9NRN5 406 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 KCND1Q9NSA2 647 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 TMCO1Q9UM00 188 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 FIS1Q9Y3D6 152 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CCT8L1PA6NM43 557 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 POLRMTO00411 1230 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 PSMD3O43242 534 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 HNRNPRO43390 633 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CDH16O75309 829 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CD4P01730 458 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CHN1P15882 459 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 H2AFXP16104 143 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 GARTP22102 1010 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 COILP38432 576 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 RIPPLY1Q0D2K3 151 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 EARS2Q5JPH6 523 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ACER1Q8TDN7 264 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SCFD1Q8WVM8 642 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 MED15Q96RN5 788 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 RBM15Q96T37 977 aaKnown RBP eCLIP7.54□□□□□ -1.22e-7■■□□□ 13.5
CTNND1-218ENST00000528232 PRMT1Q99873 361 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 PIN4Q9Y237 131 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SRRM3A6NNA2 597 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SLC4A1P02730 911 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 S100A5P33763 92 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ACADSBP45954 432 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 C4orf22Q6V702 233 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 BTN2A1Q7KYR7 527 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 NDUFAF2Q8N183 169 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 FEZF2Q8TBJ5 459 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 TMC2Q8TDI7 906 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 WDR60Q8WVS4 1066 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 PARK7Q99497 189 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 FRMD8P1Q9BZ68 369 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 OSBPL8Q9BZF1 889 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 TRPV6Q9H1D0 765 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 VPS11Q9H270 941 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ERAP1Q9NZ08 941 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 PSMC3IPQ9P2W1 217 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 GGA2Q9UJY4 613 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SYNPO2Q9UMS6 1093 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 DDTLA6NHG4 134 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 PI4K2BG5E9Z4 385 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 KCNN4O15554 427 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ZBTB24O43167 697 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SPAG6O75602 509 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ARP10275 920 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 IRAK1P51617 712 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CUL2Q13617 745 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 LRRC14Q15048 493 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 TBCCQ15814 346 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ZCWPW2Q504Y3 356 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SPATA21Q7Z572 469 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 SCN4BQ8IWT1 228 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ALKBH8Q96BT7 664 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CMTM5Q96DZ9 223 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 THAP2Q9H0W7 228 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 AGO4Q9HCK5 861 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 A1CFQ9NQ94 594 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 ABCF3Q9NUQ8 709 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 WDR37Q9Y2I8 494 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 NEU2Q9Y3R4 380 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 CLASP2O75122 1294 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 NFKBIAP25963 317 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 NAMPTP43490 491 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 KBTBD12Q3ZCT8 623 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 EFCAB12Q6NXP0 572 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 KIAA0895Q8NCT3 520 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 TTC8Q8TAM2 541 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ACTRT1Q8TDG2 376 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 KCNV2Q8TDN2 545 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 NAF1Q96HR8 494 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PNKPQ96T60 521 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ING2Q9H160 280 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 RSAD1Q9HA92 442 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 MLXIPLQ9NP71 852 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 UBN1Q9NPG3 1134 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 TFR2Q9UP52 801 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms