RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 DUSP12Q9UNI6 340 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 CEP295Q9C0D2 2601 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 MYH10P35580 1976 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 BECN2A8MW95 431 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 IKBKBO14920 756 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 SOD2P04179 222 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 SP9P0CG40 484 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 LRPAP1P30533 357 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 PIK3CAP42336 1068 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 MXI1P50539 228 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 MARSP56192 900 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 CLDN10P78369 228 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 MYL7Q01449 175 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 KRT17Q04695 432 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 ACAP1Q15027 740 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 RARS2Q5T160 578 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 FAM171A1Q5VUB5 890 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 KIAA1841Q6NSI8 718 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 TRAPPC11Q7Z392 1133 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 USP37Q86T82 979 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 CEP57Q86XR8 500 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 RNF214Q8ND24 703 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 SLC22A17Q8WUG5 538 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 UROC1Q96N76 676 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 ITGA11Q9UKX5 1188 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 CDV3Q9UKY7 258 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 AGAP1Q9UPQ3 857 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 TIMM13Q9Y5L4 95 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-210ENST00000528149 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 SMTNL1A8MU46 457 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 STK25O00506 426 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 TEX28O15482 410 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 PHACTR2O75167 634 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 TADA2AO75478 443 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 B3GAT3O94766 335 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CLSTN1O94985 981 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 VNN1O95497 513 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 HLA-DRAP01903 254 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 C4BPAP04003 597 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 ATP1A3P13637 1013 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 ZNF18P17022 549 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 SDHBP21912 280 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 RPL9P32969 192 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 GLUD2P49448 558 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 ENPEPQ07075 957 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 TDGQ13569 410 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 KRT31Q15323 416 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CCDC142Q17RM4 750 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CBWD6Q4V339 395 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CBWD3Q5JTY5 395 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CBWD5Q5RIA9 395 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 PALB2Q86YC2 1186 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 COL26A1Q96A83 441 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 COLEC11Q9BWP8 271 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 TMEM8AQ9HCN3 771 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 FRYQ5TBA9 3013 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 C2orf16Q68DN1 1984 aa12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 CNOT1A5YKK6 2376 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-210ENST00000528149 SETXQ7Z333 2677 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 KRBA1A5PL33 1030 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 TMEM189-UBE2V1I3L0A0 370 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 PIRO00625 290 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 HCRTO43612 131 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 NARSO43776 548 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 CAVIN2O95810 425 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 URODP06132 367 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 FMO5P49326 533 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 AP3M2P53677 418 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 MYL6P60660 151 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 DSG1Q02413 1049 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 KCNH2Q12809 1159 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 MAN2A1Q16706 1144 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 ZACNQ401N2 412 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 SV2AQ7L0J3 742 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 ST13P5Q8NFI4 369 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 ZNF560Q96MR9 790 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 TMEM209Q96SK2 561 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 NGRNQ9NPE2 291 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 NCDNQ9UBB6 729 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms