RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CCDC34Q96HJ3 373 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 GPR88Q9GZN0 384 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 GZF1Q9H116 711 aaPredicted RBP35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 GABRDO14764 452 aa35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 TNNI1P19237 187 aa35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 LHX1P48742 406 aa35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 MYL7Q01449 175 aa35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 CWF19L1Q69YN2 538 aaKnown RBP35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 ELSPBP1Q96BH3 223 aa35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 CCDC127Q96BQ5 260 aa35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 DDX43Q9NXZ2 648 aaKnown RBP35.49■■■■□ 3.27
SSSCA1-205ENST00000527920 KRBA1A5PL33 1030 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 FGF19O95750 216 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 PRR29P0C7W0 189 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 MYL4P12829 197 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 KCNB1Q14721 858 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 SOWAHAQ2M3V2 549 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 ADGRF2Q8IZF7 708 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 TMEM105Q8N8V8 129 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 ST13P5Q8NFI4 369 aaPredicted RBP35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 ASB16Q96NS5 453 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 SEPT5Q99719 369 aaPredicted RBP35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 KXD1Q9BQD3 176 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 PCDHB5Q9Y5E4 795 aa35.48■■■■□ 3.27
SSSCA1-205ENST00000527920 HAPLN1P10915 354 aaPredicted RBP35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 PCSK1P29120 753 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 GPC5P78333 572 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 VEPH1Q14D04 833 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 DNAJB7Q7Z6W7 309 aaPredicted RBP35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 PRSS33Q8NF86 280 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 SHKBP1Q8TBC3 707 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 TRPV4Q9HBA0 871 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 ABCB6Q9NP58 842 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 ARHGEF3Q9NR81 526 aa35.47■■■■□ 3.27
SSSCA1-205ENST00000527920 WDFY4Q6ZS81 3184 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 AOC1P19801 751 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 FCARP24071 287 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 PTPN5P54829 565 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 CLDN10P78369 228 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 PFKPQ01813 784 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 MGAT5BQ3V5L5 792 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 INTS6LQ5JSJ4 861 aaKnown RBP35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 FAM78AQ5JUQ0 283 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 FLCNQ8NFG4 579 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 SMARCD2Q92925 531 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 PKMYT1Q99640 499 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 ABI2Q9NYB9 513 aaPredicted RBP35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 CACNA1HO95180 2353 aa35.46■■■■□ 3.27
SSSCA1-205ENST00000527920 NRG2O14511 850 aaPredicted RBP35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 SOAT2O75908 522 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 STAU1O95793 577 aaKnown RBP35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 ATF6P18850 670 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 AP3M2P53677 418 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 PHLDB3Q6NSJ2 640 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 ZFP14Q9HCL3 533 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 CA14Q9ULX7 337 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 TRAF3IP3Q9Y228 551 aa35.45■■■■□ 3.27
SSSCA1-205ENST00000527920 FAM163BP0C2L3 166 aa35.44■■■■□ 3.26
SSSCA1-205ENST00000527920 TANGO2Q6ICL3 276 aa35.44■■■■□ 3.26
SSSCA1-205ENST00000527920 PARD3BQ8TEW8 1205 aa35.44■■■■□ 3.26
SSSCA1-205ENST00000527920 TMLHEQ9NVH6 421 aa35.44■■■■□ 3.26
SSSCA1-205ENST00000527920 NR3C1P04150 777 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 NHLH1Q02575 133 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 TEAD2Q15562 447 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 NFIL3Q16649 462 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 OSTM1Q86WC4 334 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 FMR1NBQ8N0W7 255 aaPredicted RBP35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 KBTBD7Q8WVZ9 684 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 ZNF516Q92618 1163 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 ZSWIM3Q96MP5 696 aa35.43■■■■□ 3.26
SSSCA1-205ENST00000527920 PIEZO1Q92508 2521 aa35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 GOLGA6L4A6NEF3 574 aa35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 GALR2O43603 387 aaPredicted RBP35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 CST3P01034 146 aaPredicted RBP35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 WARSP23381 471 aaKnown RBP35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 ATICP31939 592 aa35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 GUF1Q8N442 669 aaKnown RBP35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 PLEKHO2Q8TD55 490 aa35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 FUBP3Q96I24 572 aaKnown RBP eCLIP35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 SHDQ96IW2 340 aa35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 IRF2BPLQ9H1B7 796 aa35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 ZNF334Q9HCZ1 680 aaPredicted RBP35.42■■■■□ 3.26
SSSCA1-205ENST00000527920 A0A1W2PRU2 124 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 CALUO43852 315 aaPredicted RBP35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 GJA1P17302 382 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 TCF15Q12870 199 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 CFAP221Q4G0U5 840 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 GAREM2Q75VX8 874 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 ZSCAN18Q8TBC5 510 aaPredicted RBP35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 FAM200AQ8TCP9 573 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 E2F7Q96AV8 911 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 LPIN3Q9BQK8 851 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 PLA2G2FQ9BZM2 168 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 TBC1D17Q9HA65 648 aa35.41■■■■□ 3.26
SSSCA1-205ENST00000527920 MAPK13O15264 365 aa35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 TACC1O75410 805 aa35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 ACAT1P24752 427 aaKnown RBP35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 STARD6P59095 220 aa35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 SYAP1Q96A49 352 aaPredicted RBP35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 SLITRK6Q9H5Y7 841 aa35.4■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms