RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MAPK8IP1Q9UQF2 711 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 FAM237AA0A1B0GTK4 181 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 HCRTO43612 131 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 PHACTR2O75167 634 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 TUFMP49411 452 aaKnown RBP16.68■□□□□ 0.26
CAPN1-213ENST00000527897 CASP4P49662 377 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 FAM78AQ5JUQ0 283 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 CWF19L1Q69YN2 538 aaKnown RBP16.68■□□□□ 0.26
CAPN1-213ENST00000527897 DNAJB7Q7Z6W7 309 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-213ENST00000527897 ITIH5Q86UX2 942 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 OSTM1Q86WC4 334 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 TMEM86AQ8N2M4 240 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 LEMD2Q8NC56 503 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 SPPL2BQ8TCT7 592 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 ZSWIM3Q96MP5 696 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 PLA2G2FQ9BZM2 168 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 ARHGEF3Q9NR81 526 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 GDAP2Q9NXN4 497 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 PCDHB5Q9Y5E4 795 aa16.68■□□□□ 0.26
CAPN1-213ENST00000527897 PI15O43692 258 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
CAPN1-213ENST00000527897 MOSPD3O75425 235 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-213ENST00000527897 NPR3P17342 541 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 SMARCB1Q12824 385 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 DPYDQ12882 1025 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 TRPC3Q13507 836 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 GRM2Q14416 872 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 SOWAHAQ2M3V2 549 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 CEP135Q66GS9 1140 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 TMC8Q8IU68 726 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 GPIHBP1Q8IV16 184 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 C12orf56Q8IXR9 622 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 TOP6BLQ8N6T0 577 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 ZSCAN18Q8TBC5 510 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-213ENST00000527897 C2orf15Q8WU43 125 aaKnown RBP16.67■□□□□ 0.26
CAPN1-213ENST00000527897 PSMG2Q969U7 264 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 PRRX2Q99811 253 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 TBC1D17Q9HA65 648 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 ZFP14Q9HCL3 533 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 ZNF334Q9HCZ1 680 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-213ENST00000527897 GTF3C4Q9UKN8 822 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 ASB3Q9Y575 518 aa16.67■□□□□ 0.26
CAPN1-213ENST00000527897 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-213ENST00000527897 ECI2O75521 394 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 MICAL2O94851 1124 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 KIF20AO95235 890 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 NR3C1P04150 777 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 PDGFRBP09619 1106 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 HAPLN1P10915 354 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-213ENST00000527897 ATF6P18850 670 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 GABRR2P28476 465 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 PCSK1P29120 753 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 LHX1P48742 406 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 CLCN5P51795 746 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 EPHA5P54756 1037 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 PTPN5P54829 565 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 NHLH1Q02575 133 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 BIRC3Q13489 604 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
CAPN1-213ENST00000527897 NFE2Q16621 373 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-213ENST00000527897 CCDC142Q17RM4 750 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 INTS6LQ5JSJ4 861 aaKnown RBP16.66■□□□□ 0.26
CAPN1-213ENST00000527897 STXBP5Q5T5C0 1151 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 SDHAF4Q5VUM1 108 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 STKLD1Q8NE28 680 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 ZNF516Q92618 1163 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 GCNAQ96QF7 691 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 ACBD6Q9BR61 282 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 KCTD10Q9H3F6 313 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 ATXN3LQ9H3M9 355 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 SLC2A4RGQ9NR83 387 aa16.66■□□□□ 0.26
CAPN1-213ENST00000527897 H0Y858 1186 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 PDXKO00764 312 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 RHOBTB3O94955 611 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 AOC1P19801 751 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 FCARP24071 287 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 VIPR2P41587 438 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 GPR15P49685 360 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 PSMC1P62191 440 aaKnown RBP16.65■□□□□ 0.26
CAPN1-213ENST00000527897 TNNC1P63316 161 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 SPATA2LQ8IUW3 424 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-213ENST00000527897 SMARCD2Q92925 531 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 ELSPBP1Q96BH3 223 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 SYT15Q9BQS2 421 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 LRRC3Q9BY71 257 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 SNX25Q9H3E2 840 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 HSFX1Q9UBD0 423 aa16.65■□□□□ 0.26
CAPN1-213ENST00000527897 NXF1Q9UBU9 619 aaKnown RBP16.65■□□□□ 0.26
CAPN1-213ENST00000527897 MAGED2Q9UNF1 606 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-213ENST00000527897 LRRIQ3A6PVS8 624 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-213ENST00000527897 ATP2C2O75185 946 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 CYP2F1P24903 491 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 LMO2P25791 158 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 MYL6P60660 151 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 CYP4F8P98187 520 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms