RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PCDHB5Q9Y5E4 795 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 PTPRZ1P23471 2315 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-212ENST00000527887 UBE4BO95155 1302 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 F13A1P00488 732 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 HAPLN1P10915 354 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 GJA1P17302 382 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 GABRR2P28476 465 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 VIPR2P41587 438 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 LHX1P48742 406 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 ASIC1P78348 528 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 MYL7Q01449 175 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 FCHO2Q0JRZ9 810 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 MYO1EQ12965 1108 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 GRM2Q14416 872 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 DUOXA2Q1HG44 320 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 SHC4Q6S5L8 630 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 UNC13DQ70J99 1090 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 GAREM2Q75VX8 874 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 LRRTM3Q86VH5 581 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 ARID3BQ8IVW6 561 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 YAF2Q8IY57 180 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 PDCL2Q8N4E4 241 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 CXorf38Q8TB03 319 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 FAM200AQ8TCP9 573 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 DHX58Q96C10 678 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 SEPT5Q99719 369 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 PCIF1Q9H4Z3 704 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 TASP1Q9H6P5 420 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 ABCB6Q9NP58 842 aa15.27■□□□□ 0.04
CAPN1-212ENST00000527887 SPATA6Q9NWH7 488 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 MTF2Q9Y483 593 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-212ENST00000527887 PVALEFA0A1B0GWK0 134 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 GOLGA8IPA6NC78 632 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 GOLGA8JA6NMD2 632 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 NRG2O14511 850 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 DPYSL4O14531 572 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 POLR2DO15514 142 aaKnown RBP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 TNNC2P02585 160 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 CSH1P0DML2 217 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 CSH2P0DML3 217 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 CD72P21854 359 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 DDX6P26196 483 aaKnown RBP eCLIP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 TARSP26639 723 aaKnown RBP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 PCSK1P29120 753 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 ARHGAP29Q52LW3 1261 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 FAM26FQ5R3K3 315 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 TTC9BQ8N6N2 239 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 CSGALNACT1Q8TDX6 532 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 FAM3CQ92520 227 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 FAM126AQ9BYI3 521 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 FGFBP2Q9BYJ0 223 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 PDE11AQ9HCR9 933 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 INTS13Q9NVM9 706 aa15.26■□□□□ 0.03
CAPN1-212ENST00000527887 ABI2Q9NYB9 513 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-212ENST00000527887 ARNTLO00327 626 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 GABRDO14764 452 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 LRRN2O75325 713 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 PRPF40AO75400 957 aaKnown RBP15.25■□□□□ 0.03
CAPN1-212ENST00000527887 KRT19P08727 400 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 FAM163BP0C2L3 166 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 ATF6P18850 670 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 ME1P48163 572 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 WNT7BP56706 349 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 RPL10AP62906 217 aaKnown RBP15.25■□□□□ 0.03
CAPN1-212ENST00000527887 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 FZD5Q13467 585 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 PPP2R5DQ14738 602 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 GPR158Q5T848 1215 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 HS2ST1Q7LGA3 356 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 WDR49Q8IV35 697 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 MAML2Q8IZL2 1156 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-212ENST00000527887 ADSSL1Q8N142 457 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 ZNF687Q8N1G0 1237 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 FUBP3Q96I24 572 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN1-212ENST00000527887 MKNK1Q9BUB5 465 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 DDX43Q9NXZ2 648 aaKnown RBP15.25■□□□□ 0.03
CAPN1-212ENST00000527887 HSPBP1Q9NZL4 362 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 PCDHGA2Q9Y5H1 932 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 SNX9Q9Y5X1 595 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 PIAS3Q9Y6X2 628 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 ZNF292O60281 2723 aa15.25■□□□□ 0.03
CAPN1-212ENST00000527887 SHISA7A6NL88 538 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-212ENST00000527887 SOAT2O75908 522 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 NUCB2P80303 420 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 EHHADHQ08426 723 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 BFSP1Q12934 665 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 CFAP221Q4G0U5 840 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 INTS6LQ5JSJ4 861 aaKnown RBP15.24■□□□□ 0.03
CAPN1-212ENST00000527887 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 LIMS2Q7Z4I7 341 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 NOC3LQ8WTT2 800 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms