RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 A0A0U1RQF3 1178 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 BCLAF3A2AJT9 711 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 FAM221BA6H8Z2 402 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 EREGO14944 169 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CCL16O15467 120 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 DEAF1O75398 565 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 KRT38O76015 456 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 WISP1O95388 367 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 SOD2P04179 222 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CAPNS1P04632 268 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ZFYP08048 801 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 HNRNPA1P09651 372 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD7-205ENST00000527825 PNMA6AP0CW24 399 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 CHRNB1P11230 501 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ATP5JP18859 108 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 SYT1P21579 422 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 HOXA6P31267 233 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 MAPK8P45983 427 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 PXNP49023 591 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 KPNA1P52294 538 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 TPM4P67936 248 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 NTHL1P78549 312 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CREMQ03060 361 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 SRSF1Q07955 248 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD7-205ENST00000527825 KCNA1Q09470 495 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 LRMPQ12912 555 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 HNRNPDQ14103 355 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 GRM2Q14416 872 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 DSC3Q14574 896 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 LONRF3Q496Y0 759 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 TAF1BQ53T94 588 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 DGKKQ5KSL6 1271 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ARTNQ5T4W7 220 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 C1orf228Q6PIY5 440 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CCDC186Q7Z3E2 898 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 YAF2Q8IY57 180 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CACTIN-AS1Q8N1I8 211 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 IL22RA1Q8N6P7 574 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 METTL13Q8N6R0 699 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 FAM181AQ8N9Y4 354 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ITFG1Q8TB96 612 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CACTINQ8WUQ7 758 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 BCL7CQ8WUZ0 217 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 TMEM40Q8WWA1 233 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 WFDC12Q8WWY7 111 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 OSBP2Q969R2 916 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ELSPBP1Q96BH3 223 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 MCRS1Q96EZ8 462 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 MSANTD3Q96H12 275 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CRELD1Q96HD1 420 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CDHR1Q96JP9 859 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ZC3H10Q96K80 434 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 INPP4AQ96PE3 977 aaPredicted RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 CITED4Q96RK1 184 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 HERC2P3Q9BVR0 1158 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 NUP62CLQ9H1M0 184 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CLSTN2Q9H4D0 955 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 CBX8Q9HC52 389 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ZFP14Q9HCL3 533 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ZFP64Q9NPA5 681 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD7-205ENST00000527825 RBM12Q9NTZ6 932 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 DNAJB4Q9UDY4 337 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD7-205ENST00000527825 TELO2Q9Y4R8 837 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 BPTFQ12830 3046 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 WDFY3Q8IZQ1 3526 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 PHLPP2Q6ZVD8 1323 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 MYO16Q9Y6X6 1858 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 CCDC163A0A0D9SF12 145 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 PYCARD-AS1I3L0S3 204 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 M0R2C6 588 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 CDX4O14627 284 aaPredicted RBP4.48□□□□□ -1.69
CHD7-205ENST00000527825 ZNF263O14978 683 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 RNF113AO15541 343 aaKnown RBP4.48□□□□□ -1.69
CHD7-205ENST00000527825 TGM5O43548 720 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 ORC4O43929 436 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 ATG13O75143 517 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 CPP00450 1065 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 VTNP04004 478 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 SNHG28P0DPA3 235 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 NOS3P29474 1203 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 GDI1P31150 447 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 CASQ1P31415 396 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 OR1G1P47890 313 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 NOVP48745 357 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 STAT5BP51692 787 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 GSDMDP57764 484 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 MRPS9P82933 396 aaKnown RBP4.48□□□□□ -1.69
CHD7-205ENST00000527825 ST3GAL1Q11201 340 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 IQCB1Q15051 598 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 PLK5Q496M5 336 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 PABPC1LQ4VXU2 614 aaKnown RBP4.48□□□□□ -1.69
CHD7-205ENST00000527825 ASPRV1Q53RT3 343 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 TWF2Q6IBS0 349 aaKnown RBP4.48□□□□□ -1.69
CHD7-205ENST00000527825 Q6ZS52 159 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 LRRC8AQ8IWT6 810 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 CKAP2LQ8IYA6 745 aa4.48□□□□□ -1.69
CHD7-205ENST00000527825 CCAR2Q8N163 923 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms