RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MGAT5BQ3V5L5 792 aa28.28■■■□□ 2.12
TSPAN4-217ENST00000527644 SUGP1Q8IWZ8 645 aaKnown RBP28.28■■■□□ 2.12
TSPAN4-217ENST00000527644 TCEAL4Q96EI5 215 aa28.28■■■□□ 2.12
TSPAN4-217ENST00000527644 MCRS1Q96EZ8 462 aa28.28■■■□□ 2.12
TSPAN4-217ENST00000527644 SEPT5Q99719 369 aaPredicted RBP28.28■■■□□ 2.12
TSPAN4-217ENST00000527644 PCDHB5Q9Y5E4 795 aa28.28■■■□□ 2.12
TSPAN4-217ENST00000527644 LRRIQ3A6PVS8 624 aaPredicted RBP28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 NARSO43776 548 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 PHACTR2O75167 634 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 SMC2O95347 1197 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 STAU1O95793 577 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 SRFP11831 508 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 PCSK1P29120 753 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 CCR2P41597 374 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 INTS6LQ5JSJ4 861 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 CEP135Q66GS9 1140 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 ITIH5Q86UX2 942 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 OSTM1Q86WC4 334 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 TMC2Q8TDI7 906 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 PSMG2Q969U7 264 aa28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 ARIH1Q9Y4X5 557 aaPredicted RBP28.27■■■□□ 2.12
TSPAN4-217ENST00000527644 MAPK13O15264 365 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 SOAT2O75908 522 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 FAM163BP0C2L3 166 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 HAPLN1P10915 354 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 MYL4P12829 197 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 RPL13P26373 211 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 ATICP31939 592 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 DNAJB7Q7Z6W7 309 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 ELOA2Q8IYF1 753 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 ST13P5Q8NFI4 369 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 SPATA20Q8TB22 786 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 MMS19Q96T76 1030 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 RPP25Q9BUL9 199 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 LRRC3Q9BY71 257 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 TMLHEQ9NVH6 421 aa28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 ABI2Q9NYB9 513 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-217ENST00000527644 ZDBF2Q9HCK1 2354 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 NR2F2P24468 414 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 ACAT1P24752 427 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 VEPH1Q14D04 833 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 TMC8Q8IU68 726 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 KBTBD7Q8WVZ9 684 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 SYAP1Q96A49 352 aaPredicted RBP28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 GTPBP4Q9BZE4 634 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 CHMP5Q9NZZ3 219 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 WNT16Q9UBV4 365 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 FBXL21Q9UKT6 434 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 PCDHA5Q9Y5H7 936 aa28.25■■■□□ 2.11
TSPAN4-217ENST00000527644 MOSPD3O75425 235 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 PDGFBP01127 241 aaPredicted RBP28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 C4BPAP04003 597 aaKnown RBP28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 WARSP23381 471 aaKnown RBP28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 CDR1P51861 262 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 MYL6P60660 151 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 TNNC1P63316 161 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 BIRC3Q13489 604 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 WDR72Q3MJ13 1102 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 ZNF658Q5TYW1 1059 aaPredicted RBP28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 TDRD10Q5VZ19 366 aaKnown RBP28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 POTEHQ6S545 545 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 SMYD4Q8IYR2 804 aaPredicted RBP28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 FAM200AQ8TCP9 573 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 SMARCE1Q969G3 411 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 PKMYT1Q99640 499 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 ABCB6Q9NP58 842 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 SLC2A4RGQ9NR83 387 aa28.24■■■□□ 2.11
TSPAN4-217ENST00000527644 IKBKBO14920 756 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 TACC1O75410 805 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 ECI2O75521 394 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 FGF19O95750 216 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 ANP32AP39687 249 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 DLG4P78352 724 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 ADAM9Q13443 819 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 ZCWPW2Q504Y3 356 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 COBLL1Q53SF7 1204 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 GPR88Q9GZN0 384 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 XYLT2Q9H1B5 865 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 VRTNQ9H8Y1 702 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 GTF3C4Q9UKN8 822 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 CDH9Q9ULB4 789 aa28.23■■■□□ 2.11
TSPAN4-217ENST00000527644 ZNF318Q5VUA4 2279 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 NRG2O14511 850 aaPredicted RBP28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 KINO60870 393 aaKnown RBP28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 AKAP3O75969 853 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 CFHP08603 1231 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 ATF6P18850 670 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 EDRF1Q3B7T1 1238 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 FAM171BQ6P995 826 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 SHKBP1Q8TBC3 707 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 LPIN3Q9BQK8 851 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 PI4K2AQ9BTU6 479 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 KCNH6Q9H252 994 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 MFSD1Q9H3U5 465 aa28.22■■■□□ 2.11
TSPAN4-217ENST00000527644 HCRTO43612 131 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 GADD45BO75293 160 aaPredicted RBP28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 GJA1P17302 382 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 LMO2P25791 158 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 PSMC2P35998 433 aaKnown RBP28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 PRCPP42785 496 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms