RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 TXNRD2Q9NNW7 524 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 MAGEB2O15479 319 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 ABHD2P08910 425 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 NEFHP12036 1026 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 CCNG1P51959 295 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 BPIFB4P59827 614 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 SATB1Q01826 763 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 CYP24A1Q07973 514 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 UGCGQ16739 394 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 DENND1AQ8TEH3 1009 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 INPP5DQ92835 1189 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 FOXP3Q9BZS1 431 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 MRPL47Q9HD33 250 aaKnown RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 GRID1Q9ULK0 1009 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 DNALI1O14645 258 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 TPBGLP0DKB5 382 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 KRT4P19013 534 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 KLRC2P26717 231 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 PDIA2Q13087 525 aaKnown RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 MTMR1Q13613 665 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 MOGSQ13724 837 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 TKFCQ3LXA3 575 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 NLRP9Q7RTR0 991 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 MTDHQ86UE4 582 aaKnown RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 TAB3Q8N5C8 712 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 SLC7A6OSQ96CW6 309 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
CAPN1-208ENST00000527323 LBHD1Q9BQE6 289 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 GREB1LQ9C091 1923 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-208ENST00000527323 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 DHX15O43143 795 aaKnown RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 PRPF4O43172 522 aaKnown RBP eCLIP13.17□□□□□ -0.36e-6■■□□□ 11.6
CAPN1-208ENST00000527323 PIAS1O75925 651 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 T-ENOLP0DO92 83 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 GM2AP17900 193 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 GNAZP19086 355 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 GCAP28676 217 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 OTOAQ7RTW8 1153 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 RELL1Q8IUW5 271 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 EXD1Q8NHP7 514 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 CLEC4DQ8WXI8 215 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 ZNF75CPQ92670 426 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 EURLQ9NYK6 297 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 PCDHB4Q9Y5E5 795 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 KRT1P04264 644 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 CFHP08603 1231 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 TROVE2P10155 538 aaKnown RBP eCLIP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 GCNT1Q02742 428 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 OVGP1Q12889 678 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 GRIK3Q13003 919 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 MUM1Q2TAK8 710 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 SLC38A10Q9HBR0 1119 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 ALG13Q9NP73 1137 aaKnown RBP13.17□□□□□ -0.3
CAPN1-208ENST00000527323 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 LRRC42Q9Y546 428 aa13.17□□□□□ -0.3
CAPN1-208ENST00000527323 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 SGK1O00141 431 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ATP9AO75110 1047 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 DSG3P32926 999 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 TMCO4Q5TGY1 634 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 CENPUQ71F23 418 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 TMEM174Q8WUU8 243 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 C10orf82Q8WW14 230 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MFSD14AQ96MC6 490 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 RMDN3Q96TC7 470 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 DENND2DQ9H6A0 471 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 A0A0G2JND7 137 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 LIASO43766 372 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ZBED4O75132 1171 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 BANF1O75531 89 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 TJP3O95049 919 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MARK3P27448 753 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms