RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 BCO2Q9BYV7 579 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 SMYD3Q9H7B4 428 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 HCSTQ9UBK5 93 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 DNAJB4Q9UDY4 337 aa20.01■□□□□ 0.79
SMPD1-203ENST00000527275 A0A0A6YYK5 440 aaPredicted RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 GRID2IPA4D2P6 1211 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 ZBBXA8MT70 800 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 P4HA1P13674 534 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 RAP1GAPP47736 663 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 PAN2Q504Q3 1202 aaKnown RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 TMEM240Q5SV17 173 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 COLGALT2Q8IYK4 626 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 DDX27Q96GQ7 796 aaKnown RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 FAM193BQ96PV7 902 aaPredicted RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 FNDC1Q4ZHG4 1894 aaPredicted RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 F8W810 466 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 KRT5P13647 590 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 SV2CQ496J9 727 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 PALB2Q86YC2 1186 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 CREG2Q8IUH2 290 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 COG1Q8WTW3 980 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 FAXDC2Q96IV6 333 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 LBHD1Q9BQE6 289 aaPredicted RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 SDCBP2Q9H190 292 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 ACP6Q9NPH0 428 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 CISHQ9NSE2 258 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 TAS2R14Q9NYV8 317 aa20■□□□□ 0.79
SMPD1-203ENST00000527275 CXXC1Q9P0U4 656 aaPredicted RBP20■□□□□ 0.79
SMPD1-203ENST00000527275 FTCDO95954 541 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 TMEM253P0C7T8 217 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 MEI1Q5TIA1 1274 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 TMEM270Q6UE05 265 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 NOP9Q86U38 636 aaKnown RBP19.99■□□□□ 0.79
SMPD1-203ENST00000527275 SLC47A2Q86VL8 602 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 EPS8L1Q8TE68 723 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 RPGRIP1Q96KN7 1286 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 PARD6BQ9BYG5 372 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 GDAP2Q9NXN4 497 aa19.99■□□□□ 0.79
SMPD1-203ENST00000527275 ITGB1P05556 798 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 SOWAHAQ2M3V2 549 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 PSRC1Q6PGN9 363 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 UBR7Q8N806 425 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 HASPINQ8TF76 798 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 CTNNBL1Q8WYA6 563 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 UROC1Q96N76 676 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 PSMB7Q99436 277 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 MRPL9Q9BYD2 267 aaKnown RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 NRDE2Q9H7Z3 1164 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 ARGLU1Q9NWB6 273 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 NOCTQ9UK39 431 aaKnown RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 PCDHB4Q9Y5E5 795 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 PDE2AO00408 941 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 CHRNB2P17787 502 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 CXCR5P32302 372 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 NOA1Q8NC60 698 aaKnown RBP19.98■□□□□ 0.79
SMPD1-203ENST00000527275 TPCN2Q8NHX9 752 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 PDCL3Q9H2J4 239 aa19.98■□□□□ 0.79
SMPD1-203ENST00000527275 ANKRD62A6NC57 917 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 KIF4AO95239 1232 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 CYP11B1P15538 503 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 ABCB4P21439 1286 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 OR1G1P47890 313 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 ZNF394Q53GI3 561 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 TAF3Q5VWG9 929 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 CD300LGQ6UXG3 332 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 LRRC43Q8N309 656 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 CYP3A43Q9HB55 503 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 CNTN6Q9UQ52 1028 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 DCLRE1AQ6PJP8 1040 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 LRRC57Q8N9N7 239 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 RSPH1Q8WYR4 309 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 ZNF689Q96CS4 500 aaPredicted RBP19.97■□□□□ 0.79
SMPD1-203ENST00000527275 PCDHB18PQ96TA0 734 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 ISCUQ9H1K1 167 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 ANKZF1Q9H8Y5 726 aa19.97■□□□□ 0.79
SMPD1-203ENST00000527275 PRG3Q9Y2Y8 225 aaPredicted RBP19.97■□□□□ 0.79
SMPD1-203ENST00000527275 I3L4J1 428 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 CALCAP01258 141 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 FTLP02792 175 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-203ENST00000527275 CLCN6P51797 869 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 TIGD5Q53EQ6 642 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 APPL2Q8NEU8 664 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 SLC35G2Q8TBE7 412 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 MRPL45Q9BRJ2 306 aaKnown RBP19.96■□□□□ 0.79
SMPD1-203ENST00000527275 THAP2Q9H0W7 228 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 RC3H2Q9HBD1 1191 aaKnown RBP19.96■□□□□ 0.79
SMPD1-203ENST00000527275 COL4A6Q14031 1691 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 NCANO14594 1321 aa19.96■□□□□ 0.79
SMPD1-203ENST00000527275 CYB561D2O14569 222 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 MMEP08473 750 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 RHOXF2BP0C7M4 288 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 PBX3P40426 434 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 BRCC3P46736 316 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 AARSP49588 968 aaKnown RBP eCLIP19.95■□□□□ 0.78
SMPD1-203ENST00000527275 PDE6CP51160 858 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 RBBP8NLQ8NC74 664 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-203ENST00000527275 RFFLQ8WZ73 363 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 SENP8Q96LD8 212 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 RHOXF2Q9BQY4 288 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 HMGXB4Q9UGU5 601 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms