RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 C4orf33Q8N1A6 199 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 CHST13Q8NET6 341 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 ZNF606Q8WXB4 792 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 TMEM121Q9BTD3 319 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 PDLIM7Q9NR12 457 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 HOMER3Q9NSC5 361 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 WHRNQ9P202 907 aa12.65□□□□□ -0.38
CHMP1B-201ENST00000526991 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 CD19P15391 556 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 STX2P32856 288 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 SNRPFP62306 86 aaKnown RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 OGDHQ02218 1023 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 CENPCQ03188 943 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 RHBDF2Q6PJF5 856 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 C15orf39Q6ZRI6 1047 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 SLC17A8Q8NDX2 589 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 FGD4Q96M96 766 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 VPS37BQ9H9H4 285 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 TPX2Q9ULW0 747 aaKnown RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 STK38LQ9Y2H1 464 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 PARP14Q460N5 1801 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 CYP1A1P04798 512 aaPredicted RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 KRT19P08727 400 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 ARSEP51690 589 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 NFX1Q12986 1120 aaKnown RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 PTK6Q13882 451 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 PRAMEF19Q5SWL8 479 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 NOL9Q5SY16 702 aaKnown RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 TRPM8Q7Z2W7 1104 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 C12orf50Q8NA57 414 aaPredicted RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
CHMP1B-201ENST00000526991 RASA4BC9J798 803 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 PMM2O15305 246 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 RASA4O43374 803 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 VTNP04004 478 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 GBP1P32455 592 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 KCNJ2P63252 427 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 SEPT1Q8WYJ6 367 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 MINDY3Q9H8M7 445 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■■ 26.9
CHMP1B-201ENST00000526991 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 RDXP35241 583 aaKnown RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 ADCYAP1R1P41586 468 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 CDH8P55286 799 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 GPAT2Q6NUI2 795 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 EMC1Q8N766 993 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 FEZF2Q8TBJ5 459 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 CENPTQ96BT3 561 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 STMN4Q9H169 189 aaPredicted RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 ACTR5Q9H9F9 607 aaPredicted RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 PCSK1NQ9UHG2 260 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 ATXN2Q99700 1313 aaKnown RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 WDR91A4D1P6 747 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 SGK1O00141 431 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 SOCS7O14512 581 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 PAX3P23760 479 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 MAGEA4P43358 317 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 KLF1Q13351 362 aaPredicted RBP12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 SPDYCQ5MJ68 293 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 CCDC63Q8NA47 563 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 GRK7Q8WTQ7 553 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 LRRN4Q8WUT4 740 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 CPB2Q96IY4 423 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 AGTPBP1Q9UPW5 1226 aa12.63□□□□□ -0.39
CHMP1B-201ENST00000526991 LCTP09848 1927 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 DOCK3Q8IZD9 2030 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 EXOC1LA0A1B0GW35 172 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 SPDYE5A6NIY4 337 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 SNX3O60493 162 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 PECAM1P16284 738 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 BPIFB4P59827 614 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 ZNF252P-AS1Q0IIN9 211 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 SNCBQ16143 134 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 DNAJC24Q6P3W2 148 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 ZBED8Q8IZ13 594 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 DNERQ8NFT8 737 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 GIMAP7Q8NHV1 300 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 PRCCQ92733 491 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 KLF6Q99612 283 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 DHX33Q9H6R0 707 aaKnown RBP12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
CHMP1B-201ENST00000526991 AVENQ9NQS1 362 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms