RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 MCM6Q14566 821 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 PON2Q15165 354 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 RABEP1Q15276 862 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 CSRP2Q16527 193 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 TTC8Q8TAM2 541 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 FAM200AQ8TCP9 573 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 C2orf15Q8WU43 125 aaKnown RBP20.27■□□□□ 0.84
CAPN1-206ENST00000526966 RAD54LQ92698 747 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 ST6GALNAC4Q9H4F1 302 aa20.27■□□□□ 0.84
CAPN1-206ENST00000526966 NMT1P30419 496 aaKnown RBP20.26■□□□□ 0.83
CAPN1-206ENST00000526966 MCM2P49736 904 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 ACOT2P49753 483 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 TAF6P49848 677 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 POU5F1Q01860 360 aaKnown RBP20.26■□□□□ 0.83
CAPN1-206ENST00000526966 TNK2Q07912 1038 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 SMARCB1Q12824 385 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 MGAT5BQ3V5L5 792 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 PRR23CQ6ZRP0 262 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-206ENST00000526966 SPPL2BQ8TCT7 592 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 GCNAQ96QF7 691 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 SLC46A2Q9BY10 475 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 ZMYM5Q9UJ78 669 aa20.26■□□□□ 0.83
CAPN1-206ENST00000526966 TISP43B9A030 160 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 CYB561D2O14569 222 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 TBCAO75347 108 aaKnown RBP20.25■□□□□ 0.83
CAPN1-206ENST00000526966 ADRB1P08588 477 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 LONP1P36776 959 aaKnown RBP20.25■□□□□ 0.83
CAPN1-206ENST00000526966 GRIN1Q05586 938 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 KARSQ15046 597 aaKnown RBP20.25■□□□□ 0.83
CAPN1-206ENST00000526966 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 HEATR6Q6AI08 1181 aaKnown RBP20.25■□□□□ 0.83
CAPN1-206ENST00000526966 ADALQ6DHV7 355 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 SLFN12LQ6IEE8 588 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 LRRTM3Q86VH5 581 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 WDR5BQ86VZ2 330 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 METTL23Q86XA0 190 aa20.25■□□□□ 0.83
CAPN1-206ENST00000526966 PYM1Q9BRP8 204 aaKnown RBP20.25■□□□□ 0.83
CAPN1-206ENST00000526966 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 BMP15O95972 392 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 KRT18P05783 430 aaKnown RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 HAPLN1P10915 354 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 HOXC13P31276 330 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 ZC2HC1CQ53FD0 456 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 WSCD1Q658N2 575 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 TMEM150AQ86TG1 271 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 EFCAB13Q8IY85 973 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 CMTM8Q8IZV2 173 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 THEM5Q8N1Q8 247 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 LARP4BQ92615 738 aaKnown RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 FAM83CQ9BQN1 747 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 SMG9Q9H0W8 520 aaKnown RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 ZHX3Q9H4I2 956 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 THG1LQ9NWX6 298 aaKnown RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 DPP3Q9NY33 737 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 AGO2Q9UKV8 859 aaKnown RBP20.24■□□□□ 0.83
CAPN1-206ENST00000526966 MYO16Q9Y6X6 1858 aa20.24■□□□□ 0.83
CAPN1-206ENST00000526966 ANAPC1Q9H1A4 1944 aa20.23■□□□□ 0.83
CAPN1-206ENST00000526966 KIAA1549LQ6ZVL6 1849 aa20.23■□□□□ 0.83
CAPN1-206ENST00000526966 FOXD2O60548 495 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-206ENST00000526966 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
CAPN1-206ENST00000526966 HMGA1P17096 107 aaKnown RBP20.23■□□□□ 0.83
CAPN1-206ENST00000526966 CDR1P51861 262 aa20.23■□□□□ 0.83
CAPN1-206ENST00000526966 CRELD2Q6UXH1 353 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-206ENST00000526966 FAM160A2Q8N612 972 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-206ENST00000526966 GIPC2Q8TF65 315 aa20.23■□□□□ 0.83
CAPN1-206ENST00000526966 CHFRQ96EP1 664 aa20.23■□□□□ 0.83
CAPN1-206ENST00000526966 HPS4Q9NQG7 708 aa20.23■□□□□ 0.83
CAPN1-206ENST00000526966 PPP1R37O75864 691 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 F11P03951 625 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 NLRP12P59046 1061 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 PTPAQ15257 358 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 SV2CQ496J9 727 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 TMEM196Q5HYL7 178 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 PKN3Q6P5Z2 889 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 NT5DC4Q86YG4 428 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 HVCN1Q96D96 273 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 KIF9Q9HAQ2 790 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 GKN1Q9NS71 199 aa20.22■□□□□ 0.83
CAPN1-206ENST00000526966 ABI2Q9NYB9 513 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-206ENST00000526966 USP24Q9UPU5 2620 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 CCDC163A0A0D9SF12 145 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 SOBPA7XYQ1 873 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 KPNA7A9QM74 516 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 EXTL3O43909 919 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 GDF9O60383 454 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 DDX6P26196 483 aaKnown RBP eCLIP20.21■□□□□ 0.83
CAPN1-206ENST00000526966 ADSSP30520 456 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 RUNX3Q13761 415 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 TAF12Q16514 161 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 PPM1JQ5JR12 505 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 FSTL4Q6MZW2 842 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 CEP68Q76N32 757 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 ZNF720Q7Z2F6 126 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 DCP1BQ8IZD4 617 aaKnown RBP20.21■□□□□ 0.83
CAPN1-206ENST00000526966 RASSF8Q8NHQ8 419 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 USP13Q92995 863 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-206ENST00000526966 ZNF560Q96MR9 790 aa20.21■□□□□ 0.83
CAPN1-206ENST00000526966 STRA6Q9BX79 667 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms