RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 MRE11P49959 708 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 TNNC1P63316 161 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 UBE3AQ05086 875 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 KCNMA1Q12791 1236 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 MRPL58Q14197 206 aaKnown RBP9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 TCEAL5Q5H9L2 206 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 KIAA1841Q6NSI8 718 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 PHLDB3Q6NSJ2 640 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 RRAGAQ7L523 313 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 ADGRF2Q8IZF7 708 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 MRPL43Q8N983 215 aaKnown RBP9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 VN1R2Q8NFZ6 395 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 MICAL1Q8TDZ2 1067 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 CLSTN3Q9BQT9 956 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 SLC4A5Q9BY07 1137 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 DPEP3Q9H4B8 488 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 VRTNQ9H8Y1 702 aa9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
TRIM49D2-201ENST00000526396 PRRC2BQ5JSZ5 2229 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 LRRC10BA6NIK2 292 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 GOLGA6L19H0YKK7 550 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 SYN3O14994 580 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 PMM2O15305 246 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 LINC01565O15544 149 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 TRAPPC3O43617 180 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 TBC1D4O60343 1298 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 N4BP1O75113 896 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 ATP2C2O75185 946 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 CAVIN2O95810 425 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 CYP11A1P05108 521 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 PDGFRBP09619 1106 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 SPATA31D3P0C874 917 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 PNMA6AP0CW24 399 aaPredicted RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 CD58P19256 250 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 NRIP1P48552 1158 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 PSMC1P62191 440 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 FANCCQ00597 558 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 YWHAHQ04917 246 aaPredicted RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 ELAVL2Q12926 359 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 SMC1AQ14683 1233 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 PSMD5Q16401 504 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 ZNF667Q5HYK9 610 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 OVOS1Q6IE37 1185 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 TRIM65Q6PJ69 517 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 SPATA31D4Q6ZUB0 917 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 LRRTM3Q86VH5 581 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 TOP6BLQ8N6T0 577 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 APPL2Q8NEU8 664 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 KREMEN1Q96MU8 473 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 TWNKQ96RR1 684 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 BCO2Q9BYV7 579 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 MRPL17Q9NRX2 175 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 TMLHEQ9NVH6 421 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 MTRRQ9UBK8 725 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 FBXL5Q9UKA1 691 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 SIK3Q9Y2K2 1263 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 CDY1Q9Y6F8 540 aa9.47□□□□□ -0.89
TRIM49D2-201ENST00000526396 MYO9BQ13459 2157 aa9.46□□□□□ -0.89
TRIM49D2-201ENST00000526396 PLXNA3P51805 1871 aa9.46□□□□□ -0.89
TRIM49D2-201ENST00000526396 A0A1B0GTH6 734 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 GABRDO14764 452 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 P4HA2O15460 535 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 HUS1O60921 280 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 OAZ2O95190 189 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 VNN2O95498 520 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 TYMPP19971 482 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 WARSP23381 471 aaKnown RBP9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 OR1D2P34982 312 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 ARPP19P56211 112 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 UBXN1Q04323 297 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 HYAL1Q12794 435 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 CUL2Q13617 745 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 SYCP1Q15431 976 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 EXOC3L4Q17RC7 722 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 CTXN3Q4LDR2 81 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 LLGL2Q6P1M3 1020 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 GBP6Q6ZN66 633 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 PALB2Q86YC2 1186 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 PPM1KQ8N3J5 372 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 TTC9BQ8N6N2 239 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 UBR7Q8N806 425 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 ANP32BQ92688 251 aaKnown RBP9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 TAF4BQ92750 862 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 PGLYRP2Q96PD5 576 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 KLHL5Q96PQ7 755 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 PKMYT1Q99640 499 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 LSM14BQ9BX40 385 aaKnown RBP9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 RHOBTB2Q9BYZ6 727 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 IMPG2Q9BZV3 1241 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 LMAN2LQ9H0V9 348 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 CRISPLD1Q9H336 500 aa9.46□□□□□ -0.9
TRIM49D2-201ENST00000526396 RXFP1Q9HBX9 757 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms