RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ABCB6Q9NP58 842 aa19.81■□□□□ 0.76
TSPAN4-216ENST00000526055 SLC27A5Q9Y2P5 690 aa19.81■□□□□ 0.76
TSPAN4-216ENST00000526055 CFHP08603 1231 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 CCR2P41597 374 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 PTPN5P54829 565 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 MGAT5BQ3V5L5 792 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 LRRTM3Q86VH5 581 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 TMC8Q8IU68 726 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 ADGRF2Q8IZF7 708 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 HS6ST3Q8IZP7 471 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 GPR152Q8TDT2 470 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 TCEAL4Q96EI5 215 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 RPP25Q9BUL9 199 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 GDPD2Q9HCC8 539 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 DDX43Q9NXZ2 648 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 TRAF3IP3Q9Y228 551 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 PCDHB5Q9Y5E4 795 aa19.8■□□□□ 0.76
TSPAN4-216ENST00000526055 GOLGA6L4A6NEF3 574 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 MOSPD3O75425 235 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 STAU1O95793 577 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 HAPLN1P10915 354 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 MYL4P12829 197 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 NPR3P17342 541 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 AOC1P19801 751 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 CLDN10P78369 228 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 NFIL3Q16649 462 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 SOWAHAQ2M3V2 549 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 INTS6LQ5JSJ4 861 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 PHLDB3Q6NSJ2 640 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 DNAJB7Q7Z6W7 309 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 TTC9BQ8N6N2 239 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 E2F7Q96AV8 911 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 CCDC127Q96BQ5 260 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 SHDQ96IW2 340 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 ASB16Q96NS5 453 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 SEPT5Q99719 369 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 TRPV4Q9HBA0 871 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 ZFP14Q9HCL3 533 aa19.79■□□□□ 0.76
TSPAN4-216ENST00000526055 CALUO43852 315 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 PRR29P0C7W0 189 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 ATICP31939 592 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 GPC5P78333 572 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 IER5LQ5T953 404 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 CWF19L1Q69YN2 538 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 FLCNQ8NFG4 579 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 SHKBP1Q8TBC3 707 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 SMARCD2Q92925 531 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 FUBP3Q96I24 572 aaKnown RBP eCLIP19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 FAM84AQ96KN4 292 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 KXD1Q9BQD3 176 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 ARHGEF3Q9NR81 526 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 ABI2Q9NYB9 513 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 ZMYM5Q9UJ78 669 aa19.78■□□□□ 0.76
TSPAN4-216ENST00000526055 KRBA1A5PL33 1030 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 MAPK13O15264 365 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 NR3C1P04150 777 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 WARSP23381 471 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 TRPC3Q13507 836 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 MAPRE1Q15691 268 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 FAM78AQ5JUQ0 283 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 SCARA3Q6AZY7 606 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 GUF1Q8N442 669 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 TMEM105Q8N8V8 129 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 PRSS33Q8NF86 280 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 PARD3BQ8TEW8 1205 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 SYAP1Q96A49 352 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 PKMYT1Q99640 499 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 GZF1Q9H116 711 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 CDH9Q9ULB4 789 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 FRMD4BQ9Y2L6 1034 aa19.77■□□□□ 0.76
TSPAN4-216ENST00000526055 GALR2O43603 387 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 TACC1O75410 805 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 CST3P01034 146 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 ATF6P18850 670 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 FCARP24071 287 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 CDC25CP30307 473 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 STARD6P59095 220 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 RPL10AP62906 217 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 PRKCQQ04759 706 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 ENPEPQ07075 957 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 TEAD2Q15562 447 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 CFAP221Q4G0U5 840 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 ARHGAP15Q53QZ3 475 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 TANGO2Q6ICL3 276 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 FAM171BQ6P995 826 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 POTEHQ6S545 545 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 FMR1NBQ8N0W7 255 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 FAM200AQ8TCP9 573 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 TMC2Q8TDI7 906 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 DEPDC1BQ8WUY9 529 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 KBTBD7Q8WVZ9 684 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 VRTNQ9H8Y1 702 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 CA14Q9ULX7 337 aa19.76■□□□□ 0.75
TSPAN4-216ENST00000526055 A0A1W2PRU2 124 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 IKBKBO14920 756 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 SOAT2O75908 522 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 RFX1P22670 979 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 WEE1P30291 646 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 NHLH1Q02575 133 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms