RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 PSMC1P62191 440 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 POU6F2P78424 691 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 TUBB3Q13509 450 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 PPP2R5AQ15172 486 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 SRSF7Q16629 238 aaKnown RBP eCLIP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 TMEM119Q4V9L6 283 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 USP45Q70EL2 814 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 NOL8Q76FK4 1167 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 RAVER1Q8IY67 606 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 CHPFQ8IZ52 775 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 FAM9AQ8IZU1 332 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 CAMKK1Q8N5S9 505 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 SCARB1Q8WTV0 552 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 ANKS1AQ92625 1134 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 DPF1Q92782 380 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 ZNF778Q96MU6 729 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 CAMKK2Q96RR4 588 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 NUP88Q99567 741 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 VRK1Q99986 396 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 VKORC1Q9BQB6 163 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 RHOBTB2Q9BYZ6 727 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 TPSD1Q9BZJ3 242 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 MAN1C1Q9NR34 630 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 KLC4Q9NSK0 619 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 KLHL42Q9P2K6 505 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 ADAM21Q9UKJ8 722 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 PNMA8BQ9ULN7 279 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 PCDHB1Q9Y5F3 818 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 EID1Q9Y6B2 187 aa3.34□□□□□ -1.87
ECHDC1-218ENST00000525745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.34□□□□□ -1.88
ECHDC1-218ENST00000525745 COL3A1P02461 1466 aaPredicted RBP3.34□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF785A8K8V0 405 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 E7ENX8 843 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 GCOM1H8Y6P7 765 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 DTNBO60941 627 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 PRKCGP05129 697 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 GNAI3P08754 354 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 EBLN1P0CF75 366 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 NR2F6P10588 404 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 ITPKBP27987 946 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 NDUFV1P49821 464 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 GNAI1P63096 354 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 TAP2Q03519 686 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 EZH2Q15910 746 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 NFE2Q16621 373 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 PGS1Q32NB8 556 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 KHDC1Q4VXA5 237 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 CCDC93Q567U6 631 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 CCDC157Q569K6 752 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 IFIT1BQ5T764 474 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 THEMIS2Q5TEJ8 643 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 TPH2Q8IWU9 490 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 PRR18Q8N4B5 295 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 PBKQ96KB5 322 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 LRGUKQ96M69 825 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 RTFDC1Q9BY42 306 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 CDH19Q9H159 772 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 SMOC2Q9H3U7 446 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 SLAMF7Q9NQ25 335 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 CALCOCO1Q9P1Z2 691 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 NOB1Q9ULX3 412 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 PADI4Q9UM07 663 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 POLHQ9Y253 713 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 CFAP20Q9Y6A4 193 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 ADGRA2Q96PE1 1338 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 KIF27Q86VH2 1401 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 RRBP1Q9P2E9 1410 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 CECR2Q9BXF3 1484 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 TOP2BQ02880 1626 aa3.33□□□□□ -1.88
ECHDC1-218ENST00000525745 WDR27A2RRH5 827 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 F2RL2O00254 374 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 TRIAP1O43715 76 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 AP1G1O43747 822 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 VPS4BO75351 444 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 OFD1O75665 1012 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 ANXA1P04083 346 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 GJB1P08034 283 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 CELA2AP08217 269 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 U2AF1L5P0DN76 240 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 HSPA6P17066 643 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 CHRM3P20309 590 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 MALP21145 153 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 SMARCA1P28370 1054 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 CCT8P50990 548 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 U2AF1Q01081 240 aaKnown RBP eCLIP3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 DSC2Q02487 901 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 GRM1Q13255 1194 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 GTF2H3Q13889 308 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 LRRC41Q15345 812 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 KIAA1614Q5VZ46 1190 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 SLC4A10Q6U841 1118 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 TMPRSS9Q7Z410 1059 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 CATIPQ7Z7H3 387 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 GRAMD1CQ8IYS0 662 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 C3orf20Q8ND61 904 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 POC1BQ8TC44 478 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 SCAMP4Q969E2 229 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 FKBP10Q96AY3 582 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 DMRTA2Q96SC8 542 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 MAP3K14Q99558 947 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms