RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 GAGE13Q4V321 117 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 NGDNQ8NEJ9 315 aaKnown RBP6.87□□□□□ -1.31
ATM-208ENST00000525537 HTRA1Q92743 480 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 MRI1Q9BV20 369 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 MS4A7Q9GZW8 240 aaPredicted RBP6.87□□□□□ -1.31
ATM-208ENST00000525537 PCDHAC1Q9H158 963 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 PABPC3Q9H361 631 aaKnown RBP6.87□□□□□ -1.31
ATM-208ENST00000525537 FAM184BQ9ULE4 1060 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 MTO1Q9Y2Z2 717 aaKnown RBP6.87□□□□□ -1.31
ATM-208ENST00000525537 AFG3L2Q9Y4W6 797 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 HS3ST4Q9Y661 456 aa6.87□□□□□ -1.31
ATM-208ENST00000525537 ZMYM3Q14202 1370 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 TCRBV7S2A1N4TA0A589 114 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 HMX3A6NHT5 357 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 FCHO1O14526 889 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 ACTL6BO94805 426 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 HAUS5O94927 633 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 TBX18O95935 607 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 PIM1P11309 404 aaPredicted RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 CKBP12277 381 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 ATP1A3P13637 1013 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 IGFBP6P24592 240 aaPredicted RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 CASRP41180 1078 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 NCKAP1LP55160 1127 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 PSMC1P62191 440 aaKnown RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 VAMP2P63027 116 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 SLC5A9Q2M3M2 681 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 AMOTQ4VCS5 1084 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 FAM26FQ5R3K3 315 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 TMTC4Q5T4D3 741 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 CRTC1Q6UUV9 634 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 USP37Q86T82 979 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 CCDC117Q8IWD4 279 aaPredicted RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 ABI1Q8IZP0 508 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 SCAMP4Q969E2 229 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 NOX5Q96PH1 765 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 SERINC2Q96SA4 455 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 TINAGL1Q9GZM7 467 aaPredicted RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 PRDM8Q9NQV8 689 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 XPR1Q9UBH6 696 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 ZMYND8Q9ULU4 1186 aaPredicted RBP6.86□□□□□ -1.31
ATM-208ENST00000525537 CA14Q9ULX7 337 aa6.86□□□□□ -1.31
ATM-208ENST00000525537 LOC102723971A0A1B0GUV8 181 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 CXorf49A8MYA2 514 aaPredicted RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 CCP110O43303 1012 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 ITGB5P18084 799 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 ZNF135P52742 658 aaPredicted RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 WNT3P56703 355 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 BPIFB4P59827 614 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 AP2B1P63010 937 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 CRB2Q5IJ48 1285 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 SPATA1Q5VX52 437 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 RAP1GAP2Q684P5 730 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 KRT40Q6A162 431 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 ZDHHC24Q6UX98 284 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 BRINP3Q76B58 766 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 REXO1L1PQ8IX06 675 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 FAM9BQ8IZU0 186 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 OR5M3Q8NGP4 307 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 OR1N1Q8NGS0 311 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 CENPIQ92674 756 aaPredicted RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 SDCCAG3Q96C92 435 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 KCNC2Q96PR1 638 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 PPP1R9BQ96SB3 815 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
ATM-208ENST00000525537 SPATA5L1Q9BVQ7 753 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 CPEB1Q9BZB8 566 aaKnown RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 ENKD1Q9H0I2 346 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 SIK2Q9H0K1 926 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 OR10A2Q9H208 303 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 SLC6A15Q9H2J7 730 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 TP63Q9H3D4 680 aaPredicted RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
ATM-208ENST00000525537 XPNPEP3Q9NQH7 507 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 SIRT5Q9NXA8 310 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 SLC45A2Q9UMX9 530 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 DTNAQ9Y4J8 743 aa6.85□□□□□ -1.31
ATM-208ENST00000525537 M0QYG6 137 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 RAB27BO00194 218 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 PJA2O43164 708 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 SASH1O94885 1247 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 CHEK2O96017 543 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 AMHP03971 560 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATM-208ENST00000525537 ALAS1P13196 640 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 IL13P35225 146 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 GZMKP49863 264 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 CPT1AP50416 773 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 ADCY7P51828 1080 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 NR1H2P55055 460 aa6.84□□□□□ -1.31
ATM-208ENST00000525537 POU5F1Q01860 360 aaKnown RBP6.84□□□□□ -1.31
ATM-208ENST00000525537 UBE3AQ05086 875 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms