RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 SUN2Q9UH99 717 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 GTF2IRD1Q9UHL9 959 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CDC23Q9UJX2 597 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 FBXL21Q9UKT6 434 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 BLOC1S6Q9UL45 172 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 EXOC6BQ9Y2D4 811 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 OAS3Q9Y6K5 1087 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 AK5Q9Y6K8 562 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 R4GN57 208 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 KIAA1671Q9BY89 1806 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CACNA1IQ9P0X4 2223 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 PLXNA4Q9HCM2 1894 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 OTOGLQ3ZCN5 2332 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 TTC3P53804 2025 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 LRRD1A4D1F6 860 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 FIBPO43427 364 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 DNAJC8O75937 253 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 NDUFB10O96000 172 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 PENKP01210 267 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 GSTA1P08263 222 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 HARSP12081 509 aaKnown RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 AOC1P19801 751 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 BMP6P22004 513 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 CCT6AP40227 531 aaKnown RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 ALDH5A1P51649 535 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 RPS26P62854 115 aaKnown RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 USH1GQ495M9 461 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 PLEKHG4Q58EX7 1191 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 CMPK2Q5EBM0 449 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 EMC10Q5UCC4 262 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 E4F1Q66K89 784 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 ADGRD2Q7Z7M1 963 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 LCA5Q86VQ0 697 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 LMNTD2Q8IXW0 634 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 GALNT15Q8N3T1 639 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 SAMD3Q8N6K7 520 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 NETO1Q8TDF5 533 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 SCFD2Q8WU76 684 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 SDR42E1Q8WUS8 393 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 APBB2Q92870 758 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 P2RX5Q93086 422 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 BORCS6Q96GS4 357 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 ZNF512BQ96KM6 892 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 ZNF396Q96N95 335 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 PSMG3-AS1Q96PY0 264 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 DUSP9Q99956 384 aaKnown RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 TRIM4Q9C037 500 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 DCP1AQ9NPI6 582 aaPredicted RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 PAPOLBQ9NRJ5 636 aaKnown RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 CYP39A1Q9NYL5 469 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 HDAC6Q9UBN7 1215 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 ZC3H7BQ9UGR2 993 aaKnown RBP5.42□□□□□ -1.54
CD44-218ENST00000525469 TMCO1Q9UM00 188 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 PLAGL2Q9UPG8 496 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 SLC5A6Q9Y289 635 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 WDR87Q6ZQQ6 2873 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 MYH7P12883 1935 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 ADGRA3Q8IWK6 1321 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 GPR179Q6PRD1 2367 aa5.42□□□□□ -1.54
CD44-218ENST00000525469 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 DMDP11532 3685 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 MIA3Q5JRA6 1907 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 PTPDC1A2A3K4 754 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CTAGE9A4FU28 777 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 ZSCAN9O15535 394 aaPredicted RBP5.41□□□□□ -1.54
CD44-218ENST00000525469 RAB11FIP3O75154 756 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 PAGE1O75459 146 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 GLP2RO95838 553 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 GNAI3P08754 354 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CELA3AP09093 270 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CCDC175P0C221 793 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CCDC166P0CW27 439 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 SYT1P21579 422 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TECP42680 631 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CCT5P48643 541 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 FNTAP49354 379 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CCNHP51946 323 aaPredicted RBP5.41□□□□□ -1.54
CD44-218ENST00000525469 STAT2P52630 851 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 STIM1Q13586 685 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TTF1Q15361 905 aaPredicted RBP5.41□□□□□ -1.54
CD44-218ENST00000525469 IFI16Q16666 785 aaKnown RBP5.41□□□□□ -1.54
CD44-218ENST00000525469 DGKDQ16760 1214 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TBC1D25Q3MII6 688 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 KBTBD12Q3ZCT8 623 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TNNI3KQ59H18 835 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 SLC9C2Q5TAH2 1124 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 FBXW10Q5XX13 1052 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TTBK2Q6IQ55 1244 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CES5AQ6NT32 575 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TLDC1Q6P9B6 456 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CPLX2Q6PUV4 134 aaKnown RBP5.41□□□□□ -1.54
CD44-218ENST00000525469 C16orf86Q6ZW13 317 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 CHST3Q7LGC8 479 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 FAM160B2Q86V87 743 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 TMEM57Q8N5G2 664 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 B4GALNT2Q8NHY0 566 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 ZNF507Q8TCN5 953 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 MORC4Q8TE76 937 aa5.41□□□□□ -1.54
CD44-218ENST00000525469 COG1Q8WTW3 980 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms