RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 PGLYRP2Q96PD5 576 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 PKMYT1Q99640 499 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 SLC27A5Q9Y2P5 690 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 TRIOO75962 3097 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 BICDL2A1A5D9 508 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 PI4K2BG5E9Z4 385 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 GOLGA6L22H0YM25 854 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 N4BP1O75113 896 aaKnown RBP13.87□□□□□ -0.19
CTSB-209ENST00000525315 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 LMO2P25791 158 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 PCSK1P29120 753 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
CTSB-209ENST00000525315 GCLMP48507 274 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 TUFMP49411 452 aaKnown RBP13.87□□□□□ -0.19
CTSB-209ENST00000525315 TSPY1Q01534 308 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 INTS6LQ5JSJ4 861 aaKnown RBP13.87□□□□□ -0.19
CTSB-209ENST00000525315 KLHL10Q6JEL2 608 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 FAM171BQ6P995 826 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 FRMD5Q7Z6J6 570 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 ACSF2Q96CM8 615 aaPredicted RBP13.87□□□□□ -0.19
CTSB-209ENST00000525315 MRPL45Q9BRJ2 306 aaKnown RBP13.87□□□□□ -0.19
CTSB-209ENST00000525315 TMEM8AQ9HCN3 771 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 TMLHEQ9NVH6 421 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 HCFC1R1Q9NWW0 138 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTSB-209ENST00000525315 CEP72Q9P209 647 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 POLIQ9UNA4 740 aa13.87□□□□□ -0.19
CTSB-209ENST00000525315 STX10O60499 249 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 ASS1P00966 412 aaKnown RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 HLA-DRAP01903 254 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 FSHRP23945 695 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 ALDH1A3P47895 512 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 TNNC1P63316 161 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 NTHL1P78549 312 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 TWF1Q12792 350 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 PAK1Q13153 545 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 PLD1Q13393 1074 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 ZNF699Q32M78 642 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 ZNF667Q5HYK9 610 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 KRT39Q6A163 491 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 TTC9BQ8N6N2 239 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 TDRD5Q8NAT2 981 aaKnown RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 MLKLQ8NB16 471 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 ZNF512Q96ME7 567 aaPredicted RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 MYADMQ96S97 322 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 METTL14Q9HCE5 456 aaKnown RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 NXF1Q9UBU9 619 aaKnown RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 GTF3C4Q9UKN8 822 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 CDH9Q9ULB4 789 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 CTNND2Q9UQB3 1225 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 YIPF1Q9Y548 306 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 NME7Q9Y5B8 376 aa13.86□□□□□ -0.19
CTSB-209ENST00000525315 ZFP37Q9Y6Q3 630 aaPredicted RBP13.86□□□□□ -0.19
CTSB-209ENST00000525315 MYBPHLA2RUH7 354 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 HCRTO43612 131 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ATP2C2O75185 946 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 MICAL2O94851 1124 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 RHOP08100 348 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
CTSB-209ENST00000525315 SP100P23497 879 aaPredicted RBP13.85□□□□□ -0.19
CTSB-209ENST00000525315 ACAT1P24752 427 aaKnown RBP13.85□□□□□ -0.19
CTSB-209ENST00000525315 EPHA5P54756 1037 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 CDH8P55286 799 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 STX17P56962 302 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 PABPC1LQ4VXU2 614 aaKnown RBP13.85□□□□□ -0.19
CTSB-209ENST00000525315 PRSS36Q5K4E3 855 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ELMOD1Q8N336 334 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ITFG1Q8TB96 612 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 TAS1R2Q8TE23 839 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 MED15Q96RN5 788 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 LRRC3Q9BY71 257 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 DNAJC25Q9H1X3 360 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 SNX25Q9H3E2 840 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ABCB6Q9NP58 842 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 LIMD1Q9UGP4 676 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ARMCX3Q9UH62 379 aaPredicted RBP13.85□□□□□ -0.19
CTSB-209ENST00000525315 RWDD2AQ9UIY3 292 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ASB3Q9Y575 518 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 PCDHB5Q9Y5E4 795 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 MYH10P35580 1976 aa13.85□□□□□ -0.19
CTSB-209ENST00000525315 ZNF638Q14966 1978 aaKnown RBP13.85□□□□□ -0.19
CTSB-209ENST00000525315 PMM2O15305 246 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 DCXO43602 365 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 PDGFRBP09619 1106 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 LAMP2P13473 410 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 P4HA1P13674 534 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 ALADP13716 330 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 GBP2P32456 591 aaPredicted RBP13.84□□□□□ -0.19
CTSB-209ENST00000525315 PIK3CAP42336 1068 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 EPHB3P54753 998 aa13.84□□□□□ -0.19
CTSB-209ENST00000525315 MARSP56192 900 aaKnown RBP13.84□□□□□ -0.19
CTSB-209ENST00000525315 IQCEQ6IPM2 695 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms