RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 FAM169AQ9Y6X4 670 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 TMEM94Q12767 1356 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 GPR75-ASB3A0A0A6YYF3 556 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 RGSL1A5PLK6 1076 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 CCDC169A6NNP5 214 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 H0YC42 278 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 UBXN8O00124 270 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 RIPK2O43353 540 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ADAM20O43506 726 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 SMPD2O60906 423 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 NOL3O60936 208 aaKnown RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 TSC22D2O75157 780 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ACTL6BO94805 426 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 MT-ND5P03915 603 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 AMY2AP04746 511 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 PDHA1P08559 390 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 CNPP09543 421 aaKnown RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 TMEM253P0C7T8 217 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 AMY2BP19961 511 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 MAOBP27338 520 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 TMOD1P28289 359 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 TPP2P29144 1249 aaPredicted RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 AKT1P31749 480 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 CIITAP33076 1130 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 GRK5P34947 590 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 GP5P40197 560 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 PSMB10P40306 273 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ERVK-24P63145 666 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 C19orf57Q0VDD7 668 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 MPP3Q13368 585 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ADAM9Q13443 819 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 NFE2L1Q14494 772 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 MORF4L2Q15014 288 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 EPHA7Q15375 998 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ARHGAP15Q53QZ3 475 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 PRAMEF14Q5SWL7 426 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 DEPDC1Q5TB30 811 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 GARNL3Q5VVW2 1013 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 FYB2Q5VWT5 728 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 ESPNLQ6ZVH7 1005 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 LPCAT2Q7L5N7 544 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ANKS1BQ7Z6G8 1248 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 METTL23Q86XA0 190 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 GATAD2AQ86YP4 633 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 SCML4Q8N228 414 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ANKRD35Q8N283 1001 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 OR1N1Q8NGS0 311 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 OR6Y1Q8NGX8 325 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ZNF507Q8TCN5 953 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 DLG3Q92796 817 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 C16orf92Q96LL3 132 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 WDR24Q96S15 920 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 SPXQ9BT56 116 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 FUT8Q9BYC5 575 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 USP44Q9H0E7 712 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 MMADHCQ9H3L0 296 aaPredicted RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 TAF1DQ9H5J8 278 aaPredicted RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 TASP1Q9H6P5 420 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 BRF2Q9HAW0 419 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 NOD2Q9HC29 1040 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 MID1IP1Q9NPA3 183 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 LMBRD1Q9NUN5 540 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 TAS2R3Q9NYW6 316 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 RGL1Q9NZL6 768 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 CGNQ9P2M7 1197 aaKnown RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 HOOK1Q9UJC3 728 aaKnown RBP4.84□□□□□ -1.63
CD44-213ENST00000525209 PCDHB1Q9Y5F3 818 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 LYVE1Q9Y5Y7 322 aa4.84□□□□□ -1.63
CD44-213ENST00000525209 ZNF608Q9ULD9 1512 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 PRSS38A1L453 326 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 C2orf71A6NGG8 1288 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 H0YAE9 185 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 FCHO1O14526 889 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 AURKAO14965 403 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 RRP9O43818 475 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 NEMFO60524 1076 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 EXOC3O60645 756 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CAMTA2O94983 1202 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 KIF20AO95235 890 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 F9P00740 461 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CST3P01034 146 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 ANXA1P04083 346 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 TUBB4AP04350 444 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 RPLP2P05387 115 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 CTSBP07858 339 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 MMEP08473 750 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 KRT15P19012 456 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 EIF2AK2P19525 551 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 IL10P22301 178 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ADH6P28332 368 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 GABRB3P28472 473 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 NTF4P34130 210 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 BUD31P41223 144 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 ASMTP46597 345 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 SULT1E1P49888 294 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CABP4P57796 275 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 RPS16P62249 146 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 AP2B1P63010 937 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms