RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 MLF2Q15773 248 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 RDH13Q8NBN7 331 aa18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 TMEM209Q96SK2 561 aa18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 TRPV4Q9HBA0 871 aa18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 DDX43Q9NXZ2 648 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 SLC27A5Q9Y2P5 690 aa18.67■□□□□ 0.58
TSPAN4-214ENST00000525201 SCN1AP35498 2009 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 KRBA1A5PL33 1030 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 PDXKO00764 312 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 CLIC2O15247 247 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 VNN2O95498 520 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 HAPLN1P10915 354 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 NPR3P17342 541 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 MAGEA9P43362 315 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 TRPC3Q13507 836 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 KMT5BQ4FZB7 885 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 INTS6LQ5JSJ4 861 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 FAM78AQ5JUQ0 283 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 C4orf50Q6ZRC1 276 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 DNAJB7Q7Z6W7 309 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 CCDC105Q8IYK2 499 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 GRAMD1CQ8IYS0 662 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 HS6ST3Q8IZP7 471 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 ZSCAN18Q8TBC5 510 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 TMEM174Q8WUU8 243 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 IRF7Q92985 503 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 TCEAL4Q96EI5 215 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 FUBP3Q96I24 572 aaKnown RBP eCLIP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 TRMT61BQ9BVS5 477 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 DNAJC25Q9H1X3 360 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 SIX4Q9UIU6 781 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 MRPS17Q9Y2R5 130 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 SIT1Q9Y3P8 196 aa18.66■□□□□ 0.58
TSPAN4-214ENST00000525201 TRIOO75962 3097 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 A0A1W2PRU2 124 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 CALUO43852 315 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 KLRC4O43908 158 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 RPN1P04843 607 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 FAM163BP0C2L3 166 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 PSMC3P17980 439 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 ATICP31939 592 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 CCR2P41597 374 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 NDUFA8P51970 172 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 STARD6P59095 220 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 TNNC1P63316 161 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 TCF15Q12870 199 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 TEAD2Q15562 447 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 LMBRD2Q68DH5 695 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 TMC8Q8IU68 726 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 SPATA2LQ8IUW3 424 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 SLC9A9Q8IVB4 645 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 YAF2Q8IY57 180 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 OR5B17Q8NGF7 314 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 CXorf38Q8TB03 319 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 SHKBP1Q8TBC3 707 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 ATOH1Q92858 354 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 SYAP1Q96A49 352 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 CCDC127Q96BQ5 260 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 NELL2Q99435 816 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 RPP25Q9BUL9 199 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 CRISPLD1Q9H336 500 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 ATXN3LQ9H3M9 355 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 BRD9Q9H8M2 597 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 UXTQ9UBK9 157 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 FRMD4BQ9Y2L6 1034 aa18.65■□□□□ 0.58
TSPAN4-214ENST00000525201 DPYSL4O14531 572 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 NCAM2O15394 837 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 PHACTR2O75167 634 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 CSH1P0DML2 217 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 CSH2P0DML3 217 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 DDX6P26196 483 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■■■□ 21.2
TSPAN4-214ENST00000525201 GABRR2P28476 465 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 SLC44A4Q53GD3 710 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 C1orf228Q6PIY5 440 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 KRBA2Q6ZNG9 492 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 TTC9BQ8N6N2 239 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 PJA1Q8NG27 643 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 MSANTD3Q96H12 275 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 CEP295NLQ96MC4 621 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 OSBPL6Q9BZF3 934 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 TRPV5Q9NQA5 729 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 OBP2AQ9NY56 170 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 HOOK1Q9UJC3 728 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 CDH9Q9ULB4 789 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 NOTCH4Q99466 2003 aa18.64■□□□□ 0.57
TSPAN4-214ENST00000525201 KANSL1LA0AUZ9 987 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 SOBPA7XYQ1 873 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 GABRDO14764 452 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 RHOBTB3O94955 611 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 CLSTN1O94985 981 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 STAU1O95793 577 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 ATF6P18850 670 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 TRIM21P19474 475 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 FCARP24071 287 aa18.63■□□□□ 0.57
TSPAN4-214ENST00000525201 STK4Q13043 487 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms