RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 ASTN2O75129 1339 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 P4HA2O15460 535 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 AVILO75366 819 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 HAUS5O94927 633 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 CYP24A1Q07973 514 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 SGSM1Q2NKQ1 1148 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 B3GNT9Q6UX72 402 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 IGDCC3Q8IVU1 814 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 PAFAH2Q99487 392 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 APOBEC3GQ9HC16 384 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■□□ 17.7
CAPN1-202ENST00000524773 SNUPNO95149 360 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 MAP3K6O95382 1288 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 NPR1P16066 1061 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 KCNA3P22001 575 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 MUTP22033 750 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 RAB27AP51159 221 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 PSMC5P62195 406 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 CENPCQ03188 943 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 FYB2Q5VWT5 728 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 POTEAQ6S8J7 498 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ENDOVQ8N8Q3 282 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 FAM136AQ96C01 138 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 DCLRE1BQ9H816 532 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 KMT5AQ9NQR1 393 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 TAS2R1Q9NYW7 299 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 TJP2Q9UDY2 1190 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 RABGEF1Q9UJ41 708 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 CHMP2BQ9UQN3 213 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 FOCADQ5VW36 1801 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 SIGLEC16A6NMB1 481 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 BAG2O95816 211 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 CCNE2O96020 404 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ENO1P06733 434 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ETS2P15036 469 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 KDSRQ06136 332 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ZNF252P-AS1Q0IIN9 211 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 OR52E8Q6IFG1 317 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ZNF276Q8N554 614 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 PDCD7Q8N8D1 485 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 FBXO36Q8NEA4 188 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 PYROXD1Q8WU10 500 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 SERAC1Q96JX3 654 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 TTC1Q99614 292 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 TRIM56Q9BRZ2 755 aaKnown RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 NMUR2Q9GZQ4 415 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 MANSC1Q9H8J5 431 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ANKFY1Q9P2R3 1169 aa13.86□□□□□ -0.19
CAPN1-202ENST00000524773 PSMC3IPQ9P2W1 217 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-202ENST00000524773 ANKRD31Q8N7Z5 1873 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 TESPA1A2RU30 521 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 H3BRJ5 948 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ATP5HO75947 161 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 TOP3BO95985 862 aaKnown RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 HLA-DRAP01903 254 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 CD48P09326 243 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 MYL2P10916 166 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 GNA15P30679 374 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ALDH1B1P30837 517 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 MAN1A1P33908 653 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ARFIP2P53365 341 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 IRX4P78413 519 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 LRRC74BQ6ZQY2 392 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 TEX9Q8N6V9 391 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 BTBD10Q9BSF8 475 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 KCNK13Q9HB14 408 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ACTL7BQ9Y614 415 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 MEI4A8MW99 385 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 C2CD2LO14523 706 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 LIN7AO14910 233 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 VHLP40337 213 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 CACNA2D1P54289 1103 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 NLRP11P59045 1033 aaKnown RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 MRPS35P82673 323 aaKnown RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 HIF1AQ16665 826 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 BRDTQ58F21 947 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 SLC45A4Q5BKX6 768 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 WASHC2DQ5SRD0 308 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 RNASEH2BQ5TBB1 312 aaKnown RBP13.85□□□□□ -0.19
CAPN1-202ENST00000524773 ANO5Q75V66 913 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 TSSK1BQ9BXA7 367 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
CAPN1-202ENST00000524773 PSMG1O95456 288 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 SERPINB4P48594 390 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 ARL4CP56559 192 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 ORC1Q13415 861 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms