RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CNGA2Q16280 664 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 GALNTL6Q49A17 601 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 CBWD6Q4V339 395 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 EPC2Q52LR7 807 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 CBWD3Q5JTY5 395 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 CBWD5Q5RIA9 395 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 DENND2CQ68D51 928 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 TTC27Q6P3X3 843 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 RHBDF2Q6PJF5 856 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 B3GNT9Q6UX72 402 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 OTOP2Q7RTS6 562 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 FBXO11Q86XK2 927 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 PALB2Q86YC2 1186 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 C12orf56Q8IXR9 622 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 LRRC34Q8IZ02 419 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 RPUSD2Q8IZ73 545 aaKnown RBP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 MAFAQ8NHW3 353 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 FBXO25Q8TCJ0 367 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 CTNNBL1Q8WYA6 563 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 ART4Q93070 314 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 TIFAQ96CG3 184 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 RUNDC3BQ96NL0 473 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 TAAR1Q96RJ0 339 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 IWS1Q96ST2 819 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 RMDN3Q96TC7 470 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 AGPAT1Q99943 283 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 HSD17B14Q9BPX1 270 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 ZSWIM1Q9BR11 485 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 THAP2Q9H0W7 228 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 MTIF3Q9H2K0 278 aaKnown RBP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 CENPHQ9H3R5 247 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 AZI2Q9H6S1 392 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 AGPAT3Q9NRZ7 376 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 TRMT13Q9NUP7 481 aaKnown RBP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 APEX2Q9UBZ4 518 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 MRPL11Q9Y3B7 192 aaKnown RBP8.33□□□□□ -1.08
SPIDR-223ENST00000524033 PCDHA1Q9Y5I3 950 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 ALPK3Q96L96 1907 aa8.33□□□□□ -1.08
SPIDR-223ENST00000524033 SIP14410 1827 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 PODXLO00592 558 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 P4HA2O15460 535 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 RIPK2O43353 540 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 KIF1CO43896 1103 aaKnown RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 PSMD10O75832 226 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 CYP2C9P11712 490 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 TNFAIP3P21580 790 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 NMT1P30419 496 aaKnown RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 SLC8A1P32418 973 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 MARCKSL1P49006 195 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 NCALDP61601 193 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 PPP2R5CQ13362 524 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 LY6KQ17RY6 165 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 PRR16Q569H4 304 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 FAM47CQ5HY64 1035 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ARHGEF16Q5VV41 709 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 TCERG1LQ5VWI1 586 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 CRELD2Q6UXH1 353 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 SEPT14Q6ZU15 432 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 CYFIP1Q7L576 1253 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 SYTL5Q8TDW5 730 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 HERVK_113Q902F9 699 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 KRT35Q92764 455 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 COPS5Q92905 334 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 SLC5A5Q92911 643 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 CDK15Q96Q40 435 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 AMNQ9BXJ7 453 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 PBX4Q9BYU1 374 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ROPN1BQ9BZX4 212 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 BHMT2Q9H2M3 363 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 IKZF4Q9H2S9 585 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ZHX3Q9H4I2 956 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ROPN1Q9HAT0 212 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 AAASQ9NRG9 546 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 PGPEP1Q9NXJ5 209 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 CXXC1Q9P0U4 656 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 BCCIPQ9P287 314 aaKnown RBP eCLIP8.32□□□□□ -1.08
SPIDR-223ENST00000524033 MSRAQ9UJ68 235 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ODF2LQ9ULJ1 636 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 SNX24Q9Y343 169 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
SPIDR-223ENST00000524033 UMODL1Q5DID0 1318 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TRANK1O15050 2925 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 MAPK13O15264 365 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TP73O15350 636 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SNX3O60493 162 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TCEA3O75764 348 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 FAM13AO94988 1023 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 ATG7O95352 703 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CFBP00751 764 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CYP1A2P05177 515 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms