RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 IMPG2Q9BZV3 1241 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 WDR6Q9NNW5 1121 aaKnown RBP13.42□□□□□ -0.26
CCNC-216ENST00000523961 HSFX1Q9UBD0 423 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 NXF1Q9UBU9 619 aaKnown RBP13.42□□□□□ -0.26
CCNC-216ENST00000523961 DACH1Q9UI36 760 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 RWDD2AQ9UIY3 292 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 POLIQ9UNA4 740 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 INSL5Q9Y5Q6 135 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 TTC28Q96AY4 2481 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 A0A0C4DFX4 3053 aa13.42□□□□□ -0.26
CCNC-216ENST00000523961 CLUHO75153 1309 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 LOC730098B7Z3J9 87 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 GNA14O95837 355 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
CCNC-216ENST00000523961 MXI1P50539 228 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 NLRP12P59046 1061 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 DUSP4Q13115 394 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 PLD1Q13393 1074 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 NFE2Q16621 373 aaPredicted RBP13.41□□□□□ -0.26
CCNC-216ENST00000523961 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
CCNC-216ENST00000523961 INTS6LQ5JSJ4 861 aaKnown RBP13.41□□□□□ -0.26
CCNC-216ENST00000523961 LRRTM3Q86VH5 581 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 ATAD1Q8NBU5 361 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 SPPL2BQ8TCT7 592 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 KBTBD7Q8WVZ9 684 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 SRRTQ9BXP5 876 aaKnown RBP13.41□□□□□ -0.26
CCNC-216ENST00000523961 SNX25Q9H3E2 840 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 USTQ9Y2C2 406 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 NCOR1O75376 2440 aa13.41□□□□□ -0.26
CCNC-216ENST00000523961 DLL1O00548 723 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 VNN2O95498 520 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 GNL1P36915 607 aaPredicted RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 ALDH1A3P47895 512 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 TUFMP49411 452 aaKnown RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 TWF1Q12792 350 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 RBM43Q6ZSC3 357 aaKnown RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 OTOP3Q7RTS5 596 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 GRASPQ7Z6J2 395 aaPredicted RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 OR6B3Q8NGW1 331 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
CCNC-216ENST00000523961 CD320Q9NPF0 282 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 CDH9Q9ULB4 789 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 YIPF1Q9Y548 306 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 PCDHB5Q9Y5E4 795 aa13.4□□□□□ -0.26
CCNC-216ENST00000523961 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 CCDC192P0DO97 292 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 PTPN2P17706 415 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 SP100P23497 879 aaPredicted RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 LMO2P25791 158 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 EPHB3P54753 998 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 MAPRE1Q15691 268 aaKnown RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 PABPC1LQ4VXU2 614 aaKnown RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 CT47A1Q5JQC4 288 aaPredicted RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 CCDC183Q5T5S1 534 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 ZNF512Q96ME7 567 aaPredicted RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 CRISPLD1Q9H336 500 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 SMYD3Q9H7B4 428 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 ABI2Q9NYB9 513 aaPredicted RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCNC-216ENST00000523961 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
CCNC-216ENST00000523961 GTF3C4Q9UKN8 822 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 SLC27A5Q9Y2P5 690 aa13.39□□□□□ -0.27
CCNC-216ENST00000523961 C2orf16Q68DN1 1984 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 A8MXQ7 604 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 C2CD4DB7Z1M9 353 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 HCRTO43612 131 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
CCNC-216ENST00000523961 HAPLN1P10915 354 aaPredicted RBP13.38□□□□□ -0.27
CCNC-216ENST00000523961 FSHRP23945 695 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 NTHL1P78549 312 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 TPD52L1Q16890 204 aaPredicted RBP13.38□□□□□ -0.27
CCNC-216ENST00000523961 MGAT5BQ3V5L5 792 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 WDR44Q5JSH3 913 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 SPOPLQ6IQ16 392 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 FAM171BQ6P995 826 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 SCARA5Q6ZMJ2 495 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 C4orf50Q6ZRC1 276 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms