RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CYP2J2P51589 502 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 CLDN10P78369 228 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 TCF15Q12870 199 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 DPYDQ12882 1025 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 CWF19L1Q69YN2 538 aaKnown RBP18.53■□□□□ 0.56
CCNC-213ENST00000523541 PHLDB3Q6NSJ2 640 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 KIAA0895Q8NCT3 520 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 OR5B17Q8NGF7 314 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 CGRRF1Q99675 332 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 RPP25Q9BUL9 199 aaKnown RBP18.53■□□□□ 0.56
CCNC-213ENST00000523541 SLITRK6Q9H5Y7 841 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 TRPV4Q9HBA0 871 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 ABCB6Q9NP58 842 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 ARHGEF3Q9NR81 526 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 SLC27A5Q9Y2P5 690 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 PCDHB5Q9Y5E4 795 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 SNX9Q9Y5X1 595 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 DOCK6Q96HP0 2047 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 DLATP10515 647 aaKnown RBP18.52■□□□□ 0.56
CCNC-213ENST00000523541 AOC1P19801 751 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 ATICP31939 592 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 GPC5P78333 572 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 BFSP1Q12934 665 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 VEPH1Q14D04 833 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 NFIL3Q16649 462 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 DNAJB7Q7Z6W7 309 aaPredicted RBP18.52■□□□□ 0.56
CCNC-213ENST00000523541 FAM200AQ8TCP9 573 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 TMEM209Q96SK2 561 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 LRRC3Q9BY71 257 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 GTPBP4Q9BZE4 634 aaKnown RBP18.52■□□□□ 0.56
CCNC-213ENST00000523541 CRISPLD1Q9H336 500 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 KCTD10Q9H3F6 313 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 TBC1D17Q9HA65 648 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 ZFP14Q9HCL3 533 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 DDX43Q9NXZ2 648 aaKnown RBP18.52■□□□□ 0.56
CCNC-213ENST00000523541 TRAF3IP3Q9Y228 551 aa18.52■□□□□ 0.56
CCNC-213ENST00000523541 SCN1AP35498 2009 aa18.52■□□□□ 0.55
CCNC-213ENST00000523541 KRBA1A5PL33 1030 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 SOBPA7XYQ1 873 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 MAPK13O15264 365 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 CALUO43852 315 aaPredicted RBP18.51■□□□□ 0.55
CCNC-213ENST00000523541 HAPLN1P10915 354 aaPredicted RBP18.51■□□□□ 0.55
CCNC-213ENST00000523541 WEE1P30291 646 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 ENPEPQ07075 957 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 MAPRE1Q15691 268 aaKnown RBP18.51■□□□□ 0.55
CCNC-213ENST00000523541 TAF12Q16514 161 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 SOWAHAQ2M3V2 549 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 LRRTM3Q86VH5 581 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 HS6ST3Q8IZP7 471 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 PARD3BQ8TEW8 1205 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 SMARCD2Q92925 531 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 CCDC127Q96BQ5 260 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 TCEAL4Q96EI5 215 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 FUBP3Q96I24 572 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCNC-213ENST00000523541 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 ASB16Q96NS5 453 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
CCNC-213ENST00000523541 PTPRJQ12913 1337 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 PI15O43692 258 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 TACC1O75410 805 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 MOSPD3O75425 235 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 NPR3P17342 541 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 CCR2P41597 374 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 CDR1P51861 262 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 PRKCQQ04759 706 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 MGAT5BQ3V5L5 792 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 INTS6LQ5JSJ4 861 aaKnown RBP18.5■□□□□ 0.55
CCNC-213ENST00000523541 TMC8Q8IU68 726 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 ADGRF2Q8IZF7 708 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 GUF1Q8N442 669 aaKnown RBP18.5■□□□□ 0.55
CCNC-213ENST00000523541 CEP295NLQ96MC4 621 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 SEPT5Q99719 369 aaPredicted RBP18.5■□□□□ 0.55
CCNC-213ENST00000523541 VRTNQ9H8Y1 702 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 TRPV5Q9NQA5 729 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
CCNC-213ENST00000523541 FRMD4BQ9Y2L6 1034 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 NOTCH4Q99466 2003 aa18.5■□□□□ 0.55
CCNC-213ENST00000523541 IKBKBO14920 756 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 CST3P01034 146 aaPredicted RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 GJA1P17302 382 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 WARSP23381 471 aaKnown RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 RPL13P26373 211 aaKnown RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 STARD6P59095 220 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 RPL10AP62906 217 aaKnown RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 TRPC3Q13507 836 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 CFAP221Q4G0U5 840 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 FAM78AQ5JUQ0 283 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 LMBRD2Q68DH5 695 aaPredicted RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 FAM171BQ6P995 826 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 ELOA2Q8IYF1 753 aaPredicted RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 FMR1NBQ8N0W7 255 aaPredicted RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 TMC2Q8TDI7 906 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 DEPDC1BQ8WUY9 529 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 SYAP1Q96A49 352 aaPredicted RBP18.49■□□□□ 0.55
CCNC-213ENST00000523541 TIGD1Q96MW7 591 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 PHOX2BQ99453 314 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 GOLPH3LQ9H4A5 285 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms